Clone: 9966540215930818 H11

Tagged gene: dmt
Identifier: FBgn0016792

Clone FlyFos028862(pRedFlp-Hgr)(dmt[19716]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
5536862 5540397 19166 23763 - gene dmt coding_transcript
5536862 5540397 19166 23763 - mrna FBtr0082086 coding_transcript
5539589 5540397 19166 21036 - exon coding_transcript
5539850 5540397 19166 19713 - three_prime_utr coding_transcript
5539589 5539849 19714 21036 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19790 19823 - misc_recomb FRT CLC
2358 2429 19831 19902 - cds BLRP CLC
2337 2357 19903 19923 - cds TEV CLC
2313 2336 19924 19947 - cds Precision cut site CLC
2271 2312 19948 19989 - cds V5 CLC
1548 2264 19996 20712 - cds SGFP CLC
1482 1541 20719 20778 - cds 2xTY1 CLC
dmel-5.43-3R
5539304 5539588 21037 21321 - intron coding_transcript
5537472 5539303 21322 23153 - exon coding_transcript
5537472 5539303 21322 23153 - cds coding_transcript
5537413 5537471 23154 23212 - intron coding_transcript
5536862 5537412 23213 23763 - exon coding_transcript
5536932 5537412 23213 23693 - cds coding_transcript
5536862 5536931 23694 23763 - five_prime_utr coding_transcript
5531512 5536754 23871 29113 + gene trbd coding_transcript
5520444 5531165 29460 40181 + gene Unc-115a coding_transcript
5518801 5520183 40442 41824 - gene CG32939 coding_transcript
5513119 5518516 42109 47506 + gene p24-2 coding_transcript
5512782 5518497 42128 47843 + gene Unc-115b coding_transcript

Sets

Oligos

Name/Sequence Export
dmt[19716]::S000169_fly_pretag_fwd
GTTTCAACAAGCAATGCGAGGAAGTGGAGAAGTTCCCAGTGATCATTGAAgaagtgcataccaatcaggacccgc
 fasta Fasta
dmt[19716]::S000169_fly_pretag_rev
CCTTATCAGCGACACAAAAAAATATAAATAATAAACAGGCAATGCGATTActtgtcgtcgtcatccttgtagtca
 fasta Fasta