Clone: 1686682740821248 E11

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-X
16208038	16211646	11295	14903	-	gene	CG13957	coding_transcript
16204131	16207171	15770	18810	+	gene	CG9915	coding_transcript
16200945	16202416	20525	21996	+	gene	CG9914	coding_transcript
16197947	16200957	21984	26056	-	gene	CG3679	coding_transcript
16197947	16200957	21984	26056	-	mrna	FBtr0074222	coding_transcript
16199192	16200957	21984	24811	-	exon		coding_transcript
16200248	16200957	21984	22693	-	three_prime_utr		coding_transcript
16199192	16200247	22694	24811	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	22770	22803	-	misc_recomb	FRT	CLC
2358	2429	22811	22882	-	cds	BLRP	CLC
2337	2357	22883	22903	-	cds	TEV	CLC
2313	2336	22904	22927	-	cds	Precision cut site	CLC
2271	2312	22928	22969	-	cds	V5	CLC
1548	2264	22976	23692	-	cds	SGFP	CLC
1482	1541	23699	23758	-	cds	2xTY1	CLC
dmel-5.43-X
16199009	16199191	24812	24994	-	intron		coding_transcript
16198286	16199008	24995	25717	-	exon		coding_transcript
16198286	16199008	24995	25717	-	cds		coding_transcript
16198176	16198285	25718	25827	-	intron		coding_transcript
16197947	16198175	25828	26056	-	exon		coding_transcript
16198023	16198175	25828	25980	-	cds		coding_transcript
16197947	16198022	25981	26056	-	five_prime_utr		coding_transcript
16190728	16197341	26662	33275	-	gene	CG3632	coding_transcript
16187886	16191751	32252	36117	+	gene	CG9911	coding_transcript
16182879	16187553	36450	41124	-	gene	caz	coding_transcript
16179986	16182554	41449	44017	+	gene	CG32576	coding_transcript
16180321	16181021	42982	43682	-	gene	CG3560	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG3679[22696]::S000169_fly_pretag_fwd CGACGCCCAGCATTAGGGGGCCGAGCTTCTGCAAGAAGAGCGGTTCCGGCgaagtgcataccaatcaggacccgc	Fasta
CG3679[22696]::S000169_fly_pretag_rev AGTGCTCCCCCATTCCCCATTCCTACGCAATGCACGCTCTCTATCCTCTActtgtcgtcgtcatccttgtagtca	Fasta