Clone: 35033876546138376 E12

Tagged gene: CG5867
Identifier: FBgn0027586

Clone FlyFos025437(pRedFlp-Hgr)(CG5867[29283]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
13257477 13258336 10128 10987 - gene CG31851 coding_transcript
13251509 13257426 11038 16955 - gene CG31728 coding_transcript
13246231 13250193 18271 22233 - gene CG16820 coding_transcript
13240133 13241763 26701 28331 - gene CG5945 coding_transcript
13236493 13239296 29168 33033 - gene CG5867 coding_transcript
13236493 13239296 29168 33033 - mrna FBtr0080449 coding_transcript
13239029 13239296 29168 30497 - exon coding_transcript
13239184 13239296 29168 29280 - three_prime_utr coding_transcript
13239029 13239183 29281 30497 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 29357 29390 - misc_recomb FRT CLC
2358 2429 29398 29469 - cds BLRP CLC
2337 2357 29470 29490 - cds TEV CLC
2313 2336 29491 29514 - cds Precision cut site CLC
2271 2312 29515 29556 - cds V5 CLC
1548 2264 29563 30279 - cds SGFP CLC
1482 1541 30286 30345 - cds 2xTY1 CLC
dmel-5.43-2L
13238967 13239028 30498 30559 - intron coding_transcript
13238820 13238966 30560 30706 - exon coding_transcript
13238820 13238966 30560 30706 - cds coding_transcript
13238701 13238819 30707 30825 - intron coding_transcript
13238320 13238700 30826 31206 - exon coding_transcript
13238320 13238700 30826 31206 - cds coding_transcript
13236741 13238319 31207 32785 - intron coding_transcript
13236493 13236740 32786 33033 - exon coding_transcript
13236635 13236740 32786 32891 - cds coding_transcript
13236493 13236634 32892 33033 - five_prime_utr coding_transcript
13233796 13234633 34893 35730 + gene CG15479 coding_transcript
13232039 13233059 36467 37487 - gene Prosalpha6T coding_transcript
13229642 13230720 38806 39884 - gene CG16815 coding_transcript
13227853 13228407 41119 41673 - gene CG16813 coding_transcript
13224706 13225206 44320 44820 + gene CG15480 coding_transcript
13222561 13224550 44976 46965 - gene CG16812 coding_transcript
13221394 13222315 47211 48132 + gene Ski6 coding_transcript
13219988 13221401 48125 49538 - gene CG5705 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5867[29283]::S000169_fly_pretag_fwd
CCAATGACTTCTTTGCTGCACTACCGTTCGATATGCTTGTTACCAAGAATgaagtgcataccaatcaggacccgc
 fasta Fasta
CG5867[29283]::S000169_fly_pretag_rev
TGAATCCGGAAGGTATAAATAGTAAAACAATATTAAAGTTAGGTATCTCActtgtcgtcgtcatccttgtagtca
 fasta Fasta