Clone: 35033876546138376 D04
Tagged gene: wol
Identifier: FBgn0261020
Clone | FlyFos023995(pRedFlp-Hgr)(wol[37123]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
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Grows in selection | good | |
NGS-based tag validation | bad | |
Whole tag sequencing | flipped | download [show/hide details] |
GENOME<<>>TAG TAG<<>>GENOME PREDICTED ATTTTGGTCGTGGCTGCAAATGGGCAGGGATTTGTTCATGATCTGGGTGCGATATTTGGTGGGCGCCTGGCGGATTGCCTCCATACAGAAGAAGGAAAAGGAAGTGCATACCAATCAGGACCCGCTGGACGAGGTTCACACAAACCAAGATCCACTTGATGAATTCATGGTGTCCAAGGGCGAGGAGCTGTTCACCGGCGTGGTGCCCATCCTGGTGGAGCTGGATGGCGACGTGAACGGCCACAAGTTCAGCGTGCGCGGCGAGGGCGAGGGCGACGCCACCAACGGCAAGCTGACCCTGAAGTTCATCTGCACCACCGGCAAGCTGCCCGTGCCCTGGCCCACCCTGGTGACCACCCTGACCTACGGCGTGCAGTGCTTCAGCCGCTACCCCGATCACATGAAGCAGCACGATTTCTTCAAGAGCGCCATGCCCGAGGGCTACGTGCAGGAGCGCACCATCAGCTTCAAGGATGACGGCACCTACAAGACCCGCGCCGAGGTGAAGTTCGAGGGCGATACCCTGGTGAACCGCATCGAGCTGAAGGGCATCGATTTCAAGGAGGATGGCAACATCCTGGGCCACAAGCTGGAGTACAACTTCAACAGCCACAACGTGTACATCACCGCCGATAAGCAGAAGAACGGCATCAAGGCCAACTTCAAGATCCGCCACAATGTGGAGGATGGCTCCGTGCAGCTGGCCGATCACTACCAGCAGAACACCCCCATCGGCGACGGCCCAGTGCTGCTGCCCGATAACCACTACCTGAGCACCCAGAGCGTGCTGTCCAAGGACCCCAACGAGAAGCGCGATCACATGGTGCTGCTGGAGTTCGTGACCGCCGCCGGCATCACCCTGGGCATGGATGAGCTGTACAAGCTCGAGGGCAAGCCCATCCCCAACCCCCTGCTGGGCCTGGATAGCACCCTGGAGGTGCTGTTCCAGGGCCCCGAGAACCTGTACTTCCAGGGCATGGCCAGCAGCCTGCGCCAGATCCTGGATAGCCAGAAGATGGAGTGGCGCAGCAACGCCGGCGGCAGCGGATCCTCGGGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGTCGACAGATTATAAAGACCACGATGGAGACTATAAAGATCATGACATTGACTACAAGGATGACGACGACAAGTGATGTGGACTTGGAGGGCATCTCATTCCCAATATTAACTAGCATTTTGTGTCGAACTTACTCCGCTGTCGTGCATTACCAAAACTCTTTTAACTCTAAA COVERAGE 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111222222222222222222222222222222222222111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| EV5 AGTTCGAGGGCGATACCCTGGTGAACCGCATCGAGCTGAAGGGCATCGATTTCAAGGAGGATGGCAACATCCTGGGCCACAAGCTGGAGTACAACTTCAACAGCCACAACGTGTACATCACCGCCGATAAGCAGAAGAACGGCATCAAGGCCAACTTCAAGATCCGCCACAATGTGGAGGATGGCTCCGTGCAGCTGGCCGATCACTACCAGCAGAACACCCCCATCGGCGACGGCCCAGTGCTGCTGCCCGATAACCACTACCTGAGCACCCAGAGCGTGCTGTCCAAGGACCCCAACGAGAAGCGCGATCACATGGTGCTGCTGGAGTTCGTGACCGCCGCCGGCATCACCCTGGGCATGGATGAGCTGTACAAGCTCGAGGGCAAGCCCATCCCCAACCCCCTGCTGGGCCTGGATAGCACCCTGGAGGTGCTGTTCCAGGGCCCCGAGAACCTGTACTTCCAGGGCATGGCCAGCAGCCTGCGCCAGATCCTGGATAGCCAGAAGATGGAGTGGCGCAGCAACGCCGGCGGCAGCGGATCCTCGGGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGT ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| DS88 GAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGTCGACAGATTATAAAGACCACGATGGAGACTATAAAGATCATGACATTGACTACAAGGATGACGACGACAAGTGATGTGGACTTGGAGGGCATCTCATTCCCAATATTAACTAGCATTTTGTGTCGAACTTACTCCGCTGTCGTGCATTACCAAAACTCTTTTAACTCTAAA |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
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Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
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pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
8321276 | 8325299 | 13364 | 17387 | + | gene | CG7781 | coding_transcript | |
8320324 | 8321285 | 17378 | 18339 | - | gene | CG7787 | coding_transcript | |
8316889 | 8319920 | 18743 | 21774 | + | gene | mtsh | coding_transcript | |
8311419 | 8317017 | 21646 | 27244 | - | gene | CG7806 | coding_transcript | |
8309869 | 8311144 | 27519 | 28794 | + | gene | CG7810 | coding_transcript | |
8308440 | 8309963 | 28700 | 30223 | - | gene | CG7818 | coding_transcript | |
8306684 | 8308188 | 30475 | 31979 | + | gene | CG7830 | coding_transcript | |
8305590 | 8306743 | 31920 | 33073 | - | gene | CG7840 | coding_transcript | |
8303433 | 8305376 | 33287 | 35230 | - | gene | Scgalpha | coding_transcript | |
8301345 | 8302983 | 35680 | 38380 | + | gene | wol | coding_transcript | |
8301345 | 8302983 | 35680 | 38380 | + | mrna | FBtr0079614 | coding_transcript | |
8302758 | 8302983 | 35680 | 35905 | + | exon | coding_transcript | ||
8302824 | 8302983 | 35680 | 35839 | + | five_prime_utr | coding_transcript | ||
8302758 | 8302823 | 35840 | 35905 | + | cds | coding_transcript | ||
8302699 | 8302757 | 35906 | 35964 | + | intron | coding_transcript | ||
8302524 | 8302698 | 35965 | 36139 | + | exon | coding_transcript | ||
8302524 | 8302698 | 35965 | 36139 | + | cds | coding_transcript | ||
8302333 | 8302523 | 36140 | 36330 | + | intron | coding_transcript | ||
8301936 | 8302332 | 36331 | 36727 | + | exon | coding_transcript | ||
8301936 | 8302332 | 36331 | 36727 | + | cds | coding_transcript | ||
8301880 | 8301935 | 36728 | 36783 | + | intron | coding_transcript | ||
8301345 | 8301879 | 36784 | 38380 | + | exon | coding_transcript | ||
8301537 | 8301879 | 36784 | 38188 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 37124 | 37183 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 37190 | 37906 | + | cds | SGFP | CLC | |
2271 | 2312 | 37913 | 37954 | + | cds | V5 | CLC | |
2313 | 2336 | 37955 | 37978 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 37979 | 37999 | + | cds | TEV | CLC | |
2358 | 2429 | 38000 | 38071 | + | cds | BLRP | CLC | |
3813 | 3846 | 38079 | 38112 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2L | ||||||||
8301345 | 8301536 | 38189 | 38380 | + | three_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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wol[37123]::S000169_fly_pretag_rev
ACAAAATGCTAGTTAATATTGGGAATGAGATGCCCTCCAAGTCCACATCActtgtcgtcgtcatccttgtagtca
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wol[37123]::S000169_fly_pretag_fwd
GATATTTGGTGGGCGCCTGGCGGATTGCCTCCATACAGAAGAAGGAAAAGgaagtgcataccaatcaggacccgc
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