Clone: 35033876546138376 E01

Explore vector in genome browser.

Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-3L
12260645	12262903	19805	22063	+	gene	CG32100	coding_transcript
12263068	12264453	22228	23613	-	gene	Pbgs	coding_transcript
12264753	12270366	23913	30588	-	gene	CG4300	coding_transcript
12264753	12270366	23913	30588	-	mrna	FBtr0076009	coding_transcript
12264753	12270366	23913	30588	-	mrna	FBtr0076010	coding_transcript
12264753	12266141	23913	26363	-	exon		coding_transcript
12264753	12266141	23913	26363	-	exon		coding_transcript
12264753	12265557	23913	24717	-	three_prime_utr		coding_transcript
12264753	12265557	23913	24717	-	three_prime_utr		coding_transcript
12265558	12266141	24718	26363	-	cds		coding_transcript
12265558	12266141	24718	26363	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	24794	24827	-	misc_recomb	FRT	CLC
2358	2429	24835	24906	-	cds	BLRP	CLC
2337	2357	24907	24927	-	cds	TEV	CLC
2313	2336	24928	24951	-	cds	Precision cut site	CLC
2271	2312	24952	24993	-	cds	V5	CLC
1548	2264	25000	25716	-	cds	SGFP	CLC
1482	1541	25723	25782	-	cds	2xTY1	CLC
dmel-5.43-3L
12266142	12266597	26364	26819	-	intron		coding_transcript
12266142	12266597	26364	26819	-	intron		coding_transcript
12266598	12266720	26820	26942	-	exon		coding_transcript
12266598	12266720	26820	26942	-	cds		coding_transcript
12266598	12266720	26820	26942	-	exon		coding_transcript
12266598	12266720	26820	26942	-	cds		coding_transcript
12266721	12268175	26943	28397	-	intron		coding_transcript
12266721	12267102	26943	27324	-	intron		coding_transcript
12267103	12267211	27325	27433	-	exon		coding_transcript
12267103	12267211	27325	27433	-	cds		coding_transcript
12267212	12269989	27434	30211	-	intron		coding_transcript
12268176	12268287	28398	28509	-	exon		coding_transcript
12268176	12268287	28398	28509	-	cds		coding_transcript
12268288	12269989	28510	30211	-	intron		coding_transcript
12269990	12270366	30212	30588	-	exon		coding_transcript
12269990	12270366	30212	30588	-	exon		coding_transcript
12269990	12270274	30212	30496	-	cds		coding_transcript
12269990	12270274	30212	30496	-	cds		coding_transcript
12270275	12270366	30497	30588	-	five_prime_utr		coding_transcript
12270275	12270366	30497	30588	-	five_prime_utr		coding_transcript
12270793	12274576	31015	34798	+	gene	CG10426	coding_transcript
12284056	12289121	44278	49343	-	gene	CG4328	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG4300[24720]::S000169_fly_pretag_rev GCGCTAGAAGTAGCTACTGCTGCTGCTGAGGAGTCCACCTGAGCTTGTCActtgtcgtcgtcatccttgtagtca	Fasta
CG4300[24720]::S000169_fly_pretag_fwd TTGTGCCGTCGTTCATGGAAGAGTGGCTCTTCTACCAAGTGACTTTCGCCgaagtgcataccaatcaggacccgc	Fasta