Clone: 8137439615386962 B12
Tagged gene: Iswi
Identifier: FBgn0011604
| Clone | FlyFos021803(pRedFlp-Hgr)(Iswi[15730]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2R | ||||||||
| 8524123 | 8528133 | 15437 | 20509 | - | gene | Iswi | coding_transcript | |
| 8524123 | 8528133 | 15437 | 20509 | - | mrna | FBtr0087841 | coding_transcript | |
| 8524161 | 8528133 | 15437 | 20471 | - | mrna | FBtr0087842 | coding_transcript | |
| 8524226 | 8528133 | 15437 | 20406 | - | mrna | FBtr0087843 | coding_transcript | |
| 8527557 | 8528133 | 15437 | 17075 | - | exon | coding_transcript | ||
| 8527557 | 8528133 | 15437 | 17075 | - | exon | coding_transcript | ||
| 8527557 | 8528133 | 15437 | 17075 | - | exon | coding_transcript | ||
| 8527843 | 8528133 | 15437 | 15727 | - | three_prime_utr | coding_transcript | ||
| 8527843 | 8528133 | 15437 | 15727 | - | three_prime_utr | coding_transcript | ||
| 8527843 | 8528133 | 15437 | 15727 | - | three_prime_utr | coding_transcript | ||
| 8527557 | 8527842 | 15728 | 17075 | - | cds | coding_transcript | ||
| 8527557 | 8527842 | 15728 | 17075 | - | cds | coding_transcript | ||
| 8527557 | 8527842 | 15728 | 17075 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 15804 | 15837 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 15845 | 15916 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 15917 | 15937 | - | cds | TEV | CLC | |
| 2313 | 2336 | 15938 | 15961 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 15962 | 16003 | - | cds | V5 | CLC | |
| 1548 | 2264 | 16010 | 16726 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 16733 | 16792 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2R | ||||||||
| 8527496 | 8527556 | 17076 | 17136 | - | intron | coding_transcript | ||
| 8527496 | 8527556 | 17076 | 17136 | - | intron | coding_transcript | ||
| 8527496 | 8527556 | 17076 | 17136 | - | intron | coding_transcript | ||
| 8527335 | 8527495 | 17137 | 17297 | - | exon | coding_transcript | ||
| 8527335 | 8527495 | 17137 | 17297 | - | cds | coding_transcript | ||
| 8527335 | 8527495 | 17137 | 17297 | - | exon | coding_transcript | ||
| 8527335 | 8527495 | 17137 | 17297 | - | cds | coding_transcript | ||
| 8527335 | 8527495 | 17137 | 17297 | - | exon | coding_transcript | ||
| 8527335 | 8527495 | 17137 | 17297 | - | cds | coding_transcript | ||
| 8527276 | 8527334 | 17298 | 17356 | - | intron | coding_transcript | ||
| 8527276 | 8527334 | 17298 | 17356 | - | intron | coding_transcript | ||
| 8527276 | 8527334 | 17298 | 17356 | - | intron | coding_transcript | ||
| 8525160 | 8527275 | 17357 | 19472 | - | exon | coding_transcript | ||
| 8525160 | 8527275 | 17357 | 19472 | - | cds | coding_transcript | ||
| 8525160 | 8527275 | 17357 | 19472 | - | exon | coding_transcript | ||
| 8525160 | 8527275 | 17357 | 19472 | - | cds | coding_transcript | ||
| 8525160 | 8527275 | 17357 | 19472 | - | exon | coding_transcript | ||
| 8525160 | 8527275 | 17357 | 19472 | - | cds | coding_transcript | ||
| 8525099 | 8525159 | 19473 | 19533 | - | intron | coding_transcript | ||
| 8525099 | 8525159 | 19473 | 19533 | - | intron | coding_transcript | ||
| 8525099 | 8525159 | 19473 | 19533 | - | intron | coding_transcript | ||
| 8524844 | 8525098 | 19534 | 19788 | - | exon | coding_transcript | ||
| 8524844 | 8525098 | 19534 | 19788 | - | cds | coding_transcript | ||
| 8524844 | 8525098 | 19534 | 19788 | - | exon | coding_transcript | ||
| 8524844 | 8525098 | 19534 | 19788 | - | cds | coding_transcript | ||
| 8524844 | 8525098 | 19534 | 19788 | - | exon | coding_transcript | ||
| 8524844 | 8525098 | 19534 | 19788 | - | cds | coding_transcript | ||
| 8524777 | 8524843 | 19789 | 19855 | - | intron | coding_transcript | ||
| 8524777 | 8524843 | 19789 | 19855 | - | intron | coding_transcript | ||
| 8524777 | 8524843 | 19789 | 19855 | - | intron | coding_transcript | ||
| 8524559 | 8524776 | 19856 | 20073 | - | exon | coding_transcript | ||
| 8524559 | 8524776 | 19856 | 20073 | - | cds | coding_transcript | ||
| 8524559 | 8524776 | 19856 | 20073 | - | exon | coding_transcript | ||
| 8524559 | 8524776 | 19856 | 20073 | - | cds | coding_transcript | ||
| 8524559 | 8524776 | 19856 | 20073 | - | exon | coding_transcript | ||
| 8524559 | 8524776 | 19856 | 20073 | - | cds | coding_transcript | ||
| 8524496 | 8524558 | 20074 | 20136 | - | intron | coding_transcript | ||
| 8524496 | 8524558 | 20074 | 20136 | - | intron | coding_transcript | ||
| 8524496 | 8524558 | 20074 | 20136 | - | intron | coding_transcript | ||
| 8524123 | 8524495 | 20137 | 20509 | - | exon | coding_transcript | ||
| 8524349 | 8524495 | 20137 | 20283 | - | exon | coding_transcript | ||
| 8524349 | 8524495 | 20137 | 20283 | - | exon | coding_transcript | ||
| 8524448 | 8524495 | 20137 | 20184 | - | cds | coding_transcript | ||
| 8524448 | 8524495 | 20137 | 20184 | - | cds | coding_transcript | ||
| 8524448 | 8524495 | 20137 | 20184 | - | cds | coding_transcript | ||
| 8524123 | 8524447 | 20185 | 20509 | - | five_prime_utr | coding_transcript | ||
| 8524349 | 8524447 | 20185 | 20283 | - | five_prime_utr | coding_transcript | ||
| 8524349 | 8524447 | 20185 | 20283 | - | five_prime_utr | coding_transcript | ||
| 8524243 | 8524348 | 20284 | 20389 | - | intron | coding_transcript | ||
| 8524287 | 8524348 | 20284 | 20345 | - | intron | coding_transcript | ||
| 8524226 | 8524286 | 20346 | 20406 | - | exon | coding_transcript | ||
| 8524226 | 8524286 | 20346 | 20406 | - | five_prime_utr | coding_transcript | ||
| 8524161 | 8524242 | 20390 | 20471 | - | exon | coding_transcript | ||
| 8524161 | 8524242 | 20390 | 20471 | - | five_prime_utr | coding_transcript | ||
| 8521668 | 8523666 | 20966 | 22964 | + | gene | CG33672 | coding_transcript | |
| 8521668 | 8523666 | 20966 | 22964 | + | gene | CG33671 | coding_transcript | |
| 8521122 | 8523546 | 21086 | 23510 | - | gene | spt4 | coding_transcript | |
| 8520179 | 8520959 | 23673 | 24453 | - | gene | CG33792 | coding_transcript | |
| 8516472 | 8519883 | 24749 | 28160 | + | gene | muskelin | coding_transcript | |
| 8513338 | 8516124 | 28508 | 31294 | - | gene | CG17760 | coding_transcript | |
| 8511231 | 8512857 | 31775 | 33401 | - | gene | CG30054 | coding_transcript | |
| 8500246 | 8510272 | 34360 | 44386 | - | gene | Galpha49B | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Iswi[15730]::S000169_fly_pretag_rev
TGAGTGTAGAGCCGAATCTCAGAAAAATATCTGTTTGCTTTGTCGCTTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Iswi[15730]::S000169_fly_pretag_fwd
GGAAGAGCGAGGTGGTGGCAACCAGTTCCAACTCGAAAAAGAAGAAGAAGgaagtgcataccaatcaggacccgc
|
Fasta
|