Clone: 8137439615386962 E10
Tagged gene: Taf12
Identifier: FBgn0011290
| Clone | FlyFos021607(pRedFlp-Hgr)(Taf12[43586]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 7537501 | 7538076 | 9787 | 10362 | - | gene | CG14720 | coding_transcript | |
| 7529346 | 7530662 | 17201 | 18517 | - | gene | I-t | coding_transcript | |
| 7526336 | 7528442 | 19421 | 21527 | - | gene | CG14718 | coding_transcript | |
| 7522231 | 7523384 | 24479 | 25632 | - | gene | CG14717 | coding_transcript | |
| 7519132 | 7519999 | 27864 | 28731 | + | gene | Fer3 | coding_transcript | |
| 7516107 | 7517521 | 30342 | 31756 | + | gene | CG18765 | coding_transcript | |
| 7514099 | 7515745 | 32118 | 33764 | + | gene | CG6908 | coding_transcript | |
| 7510391 | 7513852 | 34011 | 37472 | + | gene | CG6834 | coding_transcript | |
| 7506691 | 7510062 | 37801 | 41172 | + | gene | CG6830 | coding_transcript | |
| 7505481 | 7506698 | 41165 | 42382 | - | gene | Ho | coding_transcript | |
| 7504099 | 7505408 | 42455 | 44826 | + | gene | Taf12 | coding_transcript | |
| 7504099 | 7505408 | 42455 | 44826 | + | mrna | FBtr0082440 | coding_transcript | |
| 7504099 | 7505408 | 42455 | 44826 | + | mrna | FBtr0290205 | coding_transcript | |
| 7505289 | 7505408 | 42455 | 42574 | + | exon | coding_transcript | ||
| 7505289 | 7505408 | 42455 | 42574 | + | five_prime_utr | coding_transcript | ||
| 7505289 | 7505408 | 42455 | 42574 | + | exon | coding_transcript | ||
| 7505289 | 7505408 | 42455 | 42574 | + | five_prime_utr | coding_transcript | ||
| 7504099 | 7505360 | 42503 | 44826 | + | mrna | FBtr0082442 | coding_transcript | |
| 7504666 | 7505360 | 42503 | 43197 | + | exon | coding_transcript | ||
| 7504936 | 7505360 | 42503 | 42927 | + | five_prime_utr | coding_transcript | ||
| 7504907 | 7505288 | 42575 | 42956 | + | intron | coding_transcript | ||
| 7505121 | 7505288 | 42575 | 42742 | + | intron | coding_transcript | ||
| 7504666 | 7505120 | 42743 | 43197 | + | exon | coding_transcript | ||
| 7504936 | 7505120 | 42743 | 42927 | + | five_prime_utr | coding_transcript | ||
| 7504666 | 7504935 | 42928 | 43197 | + | cds | coding_transcript | ||
| 7504666 | 7504935 | 42928 | 43197 | + | cds | coding_transcript | ||
| 7504666 | 7504906 | 42957 | 43197 | + | exon | coding_transcript | ||
| 7504828 | 7504906 | 42957 | 43035 | + | five_prime_utr | coding_transcript | ||
| 7504666 | 7504827 | 43036 | 43197 | + | cds | coding_transcript | ||
| 7504595 | 7504665 | 43198 | 43268 | + | intron | coding_transcript | ||
| 7504595 | 7504665 | 43198 | 43268 | + | intron | coding_transcript | ||
| 7504595 | 7504665 | 43198 | 43268 | + | intron | coding_transcript | ||
| 7504099 | 7504594 | 43269 | 44826 | + | exon | coding_transcript | ||
| 7504099 | 7504594 | 43269 | 44826 | + | exon | coding_transcript | ||
| 7504099 | 7504594 | 43269 | 44826 | + | exon | coding_transcript | ||
| 7504274 | 7504594 | 43269 | 44651 | + | cds | coding_transcript | ||
| 7504274 | 7504594 | 43269 | 44651 | + | cds | coding_transcript | ||
| 7504274 | 7504594 | 43269 | 44651 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 43587 | 43646 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 43653 | 44369 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 44376 | 44417 | + | cds | V5 | CLC | |
| 2313 | 2336 | 44418 | 44441 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 44442 | 44462 | + | cds | TEV | CLC | |
| 2358 | 2429 | 44463 | 44534 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 44542 | 44575 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-3R | ||||||||
| 7504099 | 7504273 | 44652 | 44826 | + | three_prime_utr | coding_transcript | ||
| 7504099 | 7504273 | 44652 | 44826 | + | three_prime_utr | coding_transcript | ||
| 7504099 | 7504273 | 44652 | 44826 | + | three_prime_utr | coding_transcript | ||
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Taf12[43586]::S000169_fly_pretag_rev
AATCCGGCAAACCGAAACAGAGCCTCGACCCGATTAGATCCAATCCTCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Taf12[43586]::S000169_fly_pretag_fwd
AGGCGCACAAACAGCGCCTTGCCCTCATACGGAAAACGATCAAGAAATACgaagtgcataccaatcaggacccgc
|
Fasta
|