Clone: 8137439615386962 A10

Tagged gene: mats
Identifier: FBgn0038965

Clone FlyFos021577(pRedFlp-Hgr)(mats[33248]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
18250936 18261490 20152 30706 + gene CG13847 coding_transcript
18249027 18250447 31195 32615 + gene pinta coding_transcript
18246877 18248568 33074 35827 - gene mats coding_transcript
18246877 18248568 33074 35827 - mrna FBtr0084229 coding_transcript
18247918 18248568 33074 34786 - exon coding_transcript
18248397 18248568 33074 33245 - three_prime_utr coding_transcript
18247918 18248396 33246 34786 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 33322 33355 - misc_recomb FRT CLC
2358 2429 33363 33434 - cds BLRP CLC
2337 2357 33435 33455 - cds TEV CLC
2313 2336 33456 33479 - cds Precision cut site CLC
2271 2312 33480 33521 - cds V5 CLC
1548 2264 33528 34244 - cds SGFP CLC
1482 1541 34251 34310 - cds 2xTY1 CLC
dmel-5.43-3R
18247857 18247917 34787 34847 - intron coding_transcript
18247690 18247856 34848 35014 - exon coding_transcript
18247690 18247856 34848 35014 - cds coding_transcript
18247325 18247689 35015 35379 - intron coding_transcript
18246877 18247324 35380 35827 - exon coding_transcript
18247311 18247324 35380 35393 - cds coding_transcript
18246877 18247310 35394 35827 - five_prime_utr coding_transcript
18244817 18246790 35914 37887 + gene Nop56 coding_transcript
18237055 18244778 37926 45649 - gene lqfR coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
mats[33248]::S000169_fly_pretag_fwd
CGCTGCAGGAGCTCATCGACAAGCTGACGGCTAAGGATGAGCGGCAGATAgaagtgcataccaatcaggacccgc
 fasta Fasta
mats[33248]::S000169_fly_pretag_rev
CCACCGCCGCCGGAATCGCGAAAATTCGCGGCTCCATGCAGTGATTCCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta