Clone: 8137439615386962 A09
Tagged gene: BicC
Identifier: FBgn0000182
| Clone | FlyFos021395(pRedFlp-Hgr)(BicC[13801]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 16042032 | 16048626 | 13378 | 21034 | - | gene | BicC | coding_transcript | |
| 16042032 | 16048626 | 13378 | 21034 | - | mrna | FBtr0080803 | coding_transcript | |
| 16042919 | 16048626 | 13378 | 20147 | - | mrna | FBtr0080804 | coding_transcript | |
| 16044552 | 16048626 | 13378 | 18514 | - | mrna | FBtr0080805 | coding_transcript | |
| 16047958 | 16048626 | 13378 | 15108 | - | exon | coding_transcript | ||
| 16047958 | 16048626 | 13378 | 15108 | - | exon | coding_transcript | ||
| 16047958 | 16048626 | 13378 | 15108 | - | exon | coding_transcript | ||
| 16048206 | 16048626 | 13378 | 13798 | - | three_prime_utr | coding_transcript | ||
| 16048206 | 16048626 | 13378 | 13798 | - | three_prime_utr | coding_transcript | ||
| 16048206 | 16048626 | 13378 | 13798 | - | three_prime_utr | coding_transcript | ||
| 16047958 | 16048205 | 13799 | 15108 | - | cds | coding_transcript | ||
| 16047958 | 16048205 | 13799 | 15108 | - | cds | coding_transcript | ||
| 16047958 | 16048205 | 13799 | 15108 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 13875 | 13908 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 13916 | 13987 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 13988 | 14008 | - | cds | TEV | CLC | |
| 2313 | 2336 | 14009 | 14032 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 14033 | 14074 | - | cds | V5 | CLC | |
| 1548 | 2264 | 14081 | 14797 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 14804 | 14863 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2L | ||||||||
| 16047730 | 16047957 | 15109 | 15336 | - | intron | coding_transcript | ||
| 16047730 | 16047957 | 15109 | 15336 | - | intron | coding_transcript | ||
| 16047730 | 16047957 | 15109 | 15336 | - | intron | coding_transcript | ||
| 16046602 | 16047729 | 15337 | 16464 | - | exon | coding_transcript | ||
| 16046602 | 16047729 | 15337 | 16464 | - | cds | coding_transcript | ||
| 16046602 | 16047729 | 15337 | 16464 | - | exon | coding_transcript | ||
| 16046602 | 16047729 | 15337 | 16464 | - | cds | coding_transcript | ||
| 16046602 | 16047729 | 15337 | 16464 | - | exon | coding_transcript | ||
| 16046602 | 16047729 | 15337 | 16464 | - | cds | coding_transcript | ||
| 16046409 | 16046601 | 16465 | 16657 | - | intron | coding_transcript | ||
| 16046409 | 16046601 | 16465 | 16657 | - | intron | coding_transcript | ||
| 16046409 | 16046601 | 16465 | 16657 | - | intron | coding_transcript | ||
| 16046027 | 16046408 | 16658 | 17039 | - | exon | coding_transcript | ||
| 16046027 | 16046408 | 16658 | 17039 | - | cds | coding_transcript | ||
| 16046027 | 16046408 | 16658 | 17039 | - | exon | coding_transcript | ||
| 16046027 | 16046408 | 16658 | 17039 | - | cds | coding_transcript | ||
| 16046027 | 16046408 | 16658 | 17039 | - | exon | coding_transcript | ||
| 16046027 | 16046408 | 16658 | 17039 | - | cds | coding_transcript | ||
| 16045967 | 16046026 | 17040 | 17099 | - | intron | coding_transcript | ||
| 16045967 | 16046026 | 17040 | 17099 | - | intron | coding_transcript | ||
| 16045967 | 16046026 | 17040 | 17099 | - | intron | coding_transcript | ||
| 16045841 | 16045966 | 17100 | 17225 | - | exon | coding_transcript | ||
| 16045841 | 16045966 | 17100 | 17225 | - | cds | coding_transcript | ||
| 16045841 | 16045966 | 17100 | 17225 | - | exon | coding_transcript | ||
| 16045841 | 16045966 | 17100 | 17225 | - | cds | coding_transcript | ||
| 16045841 | 16045966 | 17100 | 17225 | - | exon | coding_transcript | ||
| 16045841 | 16045966 | 17100 | 17225 | - | cds | coding_transcript | ||
| 16045393 | 16045840 | 17226 | 17673 | - | intron | coding_transcript | ||
| 16045393 | 16045840 | 17226 | 17673 | - | intron | coding_transcript | ||
| 16045393 | 16045840 | 17226 | 17673 | - | intron | coding_transcript | ||
| 16045066 | 16045392 | 17674 | 18000 | - | exon | coding_transcript | ||
| 16045066 | 16045392 | 17674 | 18000 | - | cds | coding_transcript | ||
| 16045066 | 16045392 | 17674 | 18000 | - | exon | coding_transcript | ||
| 16045066 | 16045392 | 17674 | 18000 | - | cds | coding_transcript | ||
| 16045066 | 16045392 | 17674 | 18000 | - | exon | coding_transcript | ||
| 16045066 | 16045392 | 17674 | 18000 | - | cds | coding_transcript | ||
| 16045001 | 16045065 | 18001 | 18065 | - | intron | coding_transcript | ||
| 16045001 | 16045065 | 18001 | 18065 | - | intron | coding_transcript | ||
| 16045001 | 16045065 | 18001 | 18065 | - | intron | coding_transcript | ||
| 16044921 | 16045000 | 18066 | 18145 | - | exon | coding_transcript | ||
| 16044921 | 16045000 | 18066 | 18145 | - | cds | coding_transcript | ||
| 16044921 | 16045000 | 18066 | 18145 | - | exon | coding_transcript | ||
| 16044921 | 16045000 | 18066 | 18145 | - | cds | coding_transcript | ||
| 16044921 | 16045000 | 18066 | 18145 | - | exon | coding_transcript | ||
| 16044921 | 16045000 | 18066 | 18145 | - | cds | coding_transcript | ||
| 16044858 | 16044920 | 18146 | 18208 | - | intron | coding_transcript | ||
| 16044858 | 16044920 | 18146 | 18208 | - | intron | coding_transcript | ||
| 16044858 | 16044920 | 18146 | 18208 | - | intron | coding_transcript | ||
| 16044552 | 16044857 | 18209 | 18514 | - | exon | coding_transcript | ||
| 16044788 | 16044857 | 18209 | 18278 | - | exon | coding_transcript | ||
| 16044788 | 16044857 | 18209 | 18278 | - | cds | coding_transcript | ||
| 16044788 | 16044857 | 18209 | 18278 | - | exon | coding_transcript | ||
| 16044788 | 16044857 | 18209 | 18278 | - | cds | coding_transcript | ||
| 16044791 | 16044857 | 18209 | 18275 | - | cds | coding_transcript | ||
| 16044552 | 16044790 | 18276 | 18514 | - | five_prime_utr | coding_transcript | ||
| 16044473 | 16044787 | 18279 | 18593 | - | intron | coding_transcript | ||
| 16044473 | 16044787 | 18279 | 18593 | - | intron | coding_transcript | ||
| 16044423 | 16044472 | 18594 | 18643 | - | exon | coding_transcript | ||
| 16044423 | 16044472 | 18594 | 18643 | - | cds | coding_transcript | ||
| 16044423 | 16044472 | 18594 | 18643 | - | exon | coding_transcript | ||
| 16044423 | 16044472 | 18594 | 18643 | - | cds | coding_transcript | ||
| 16044362 | 16044422 | 18644 | 18704 | - | intron | coding_transcript | ||
| 16044362 | 16044422 | 18644 | 18704 | - | intron | coding_transcript | ||
| 16043824 | 16044361 | 18705 | 19242 | - | exon | coding_transcript | ||
| 16043824 | 16044361 | 18705 | 19242 | - | exon | coding_transcript | ||
| 16044055 | 16044361 | 18705 | 19011 | - | cds | coding_transcript | ||
| 16044055 | 16044361 | 18705 | 19011 | - | cds | coding_transcript | ||
| 16043824 | 16044054 | 19012 | 19242 | - | five_prime_utr | coding_transcript | ||
| 16043824 | 16044054 | 19012 | 19242 | - | five_prime_utr | coding_transcript | ||
| 16043246 | 16043823 | 19243 | 19820 | - | intron | coding_transcript | ||
| 16043246 | 16043823 | 19243 | 19820 | - | intron | coding_transcript | ||
| 16042919 | 16043245 | 19821 | 20147 | - | exon | coding_transcript | ||
| 16042919 | 16043245 | 19821 | 20147 | - | five_prime_utr | coding_transcript | ||
| 16043075 | 16043245 | 19821 | 19991 | - | exon | coding_transcript | ||
| 16043075 | 16043245 | 19821 | 19991 | - | five_prime_utr | coding_transcript | ||
| 16042528 | 16043074 | 19992 | 20538 | - | intron | coding_transcript | ||
| 16042032 | 16042527 | 20539 | 21034 | - | exon | coding_transcript | ||
| 16042032 | 16042527 | 20539 | 21034 | - | five_prime_utr | coding_transcript | ||
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
BicC[13801]::S000169_fly_pretag_rev
AAAGAAAAAAAGAATTCGAGGCAATGGGGTCGAACGACAGGAGCGGATCActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
BicC[13801]::S000169_fly_pretag_fwd
TCTCCGGAAGTGCGGCCCCAGGCGCAGAGCGCCGTCCCTCCAACCAGTGGgaagtgcataccaatcaggacccgc
|
Fasta
|