Clone: 8137439615386962 E08

Tagged gene: swm
Identifier: FBgn0002044

Clone FlyFos021165(pRedFlp-Hgr)(swm[35407]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]
Whole tag sequencing incomplete download [show/hide details]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
19482877 19484702 20903 22728 - gene CG10195 coding_transcript
19484930 19486532 22956 24558 + gene CG13084 coding_transcript
19487490 19488691 25516 26717 + gene CG13083 coding_transcript
19488682 19490083 26708 28109 - gene CG10194 coding_transcript
19490486 19491679 28512 29705 + gene CG18094 coding_transcript
19491647 19492927 29673 30953 - gene CG10189 coding_transcript
19493258 19497987 31284 37075 + gene swm coding_transcript
19493258 19497987 31284 37075 + mrna FBtr0081244 coding_transcript
19493258 19493382 31284 31408 + exon coding_transcript
19493258 19493382 31284 31408 + five_prime_utr coding_transcript
19493383 19493665 31409 31691 + intron coding_transcript
19493571 19497987 31597 37075 + mrna FBtr0081245 coding_transcript
19493571 19493957 31597 31983 + exon coding_transcript
19493571 19493898 31597 31924 + five_prime_utr coding_transcript
19493666 19493957 31692 31983 + exon coding_transcript
19493666 19493898 31692 31924 + five_prime_utr coding_transcript
19493899 19493957 31925 31983 + cds coding_transcript
19493899 19493957 31925 31983 + cds coding_transcript
19493958 19494032 31984 32058 + intron coding_transcript
19493958 19494032 31984 32058 + intron coding_transcript
19494033 19494498 32059 32524 + exon coding_transcript
19494033 19494498 32059 32524 + cds coding_transcript
19494033 19494498 32059 32524 + exon coding_transcript
19494033 19494498 32059 32524 + cds coding_transcript
19494499 19494559 32525 32585 + intron coding_transcript
19494499 19494559 32525 32585 + intron coding_transcript
19494560 19496869 32586 34895 + exon coding_transcript
19494560 19496869 32586 34895 + cds coding_transcript
19494560 19496869 32586 34895 + exon coding_transcript
19494560 19496869 32586 34895 + cds coding_transcript
19496870 19496960 34896 34986 + intron coding_transcript
19496870 19496960 34896 34986 + intron coding_transcript
19496961 19497089 34987 35115 + exon coding_transcript
19496961 19497089 34987 35115 + cds coding_transcript
19496961 19497089 34987 35115 + exon coding_transcript
19496961 19497089 34987 35115 + cds coding_transcript
19497090 19497159 35116 35185 + intron coding_transcript
19497090 19497159 35116 35185 + intron coding_transcript
19497160 19497987 35186 37075 + exon coding_transcript
19497160 19497987 35186 37075 + exon coding_transcript
19497160 19497384 35186 36472 + cds coding_transcript
19497160 19497384 35186 36472 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 35408 35467 + cds 2xTY1 CLC
1548 2264 35474 36190 + cds SGFP CLC
2271 2312 36197 36238 + cds V5 CLC
2313 2336 36239 36262 + cds Precision cut site CLC
2337 2357 36263 36283 + cds TEV CLC
2358 2429 36284 36355 + cds BLRP CLC
3813 3846 36363 36396 + misc_recomb FRT CLC
dmel-5.43-2L
19497385 19497987 36473 37075 + three_prime_utr coding_transcript
19497385 19497987 36473 37075 + three_prime_utr coding_transcript
19498179 19502268 37267 41356 + gene Top3alpha coding_transcript
19502334 19508760 41422 47848 - gene CG10188 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
swm[35407]::S000169_fly_pretag_fwd
TGGAAGATGAGGAGGAGGATGAGGAGTCCGAGGATCGCTCCTGGCGTCGTgaagtgcataccaatcaggacccgc
 fasta Fasta
swm[35407]::S000169_fly_pretag_rev
AGCCCCACGGAACTTTCCCGGCCGCCTCAACAGCGGAGGGCGATGGATCActtgtcgtcgtcatccttgtagtca
 fasta Fasta