Clone: 8137439615386962 D07

Tagged gene: pen
Identifier: FBgn0015527

Clone FlyFos020949(pRedFlp-Hgr)(pen[30475]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
21202369 21209988 15251 22870 - gene tty coding_transcript
21210823 21216117 23705 28999 + gene fliI coding_transcript
21216375 21217885 29257 31829 + gene dod coding_transcript
21217530 21220866 30412 34810 - gene pen coding_transcript
21217530 21220866 30412 34810 - mrna FBtr0077223 coding_transcript
21217530 21217776 30412 31720 - exon coding_transcript
21217530 21217590 30412 30472 - three_prime_utr coding_transcript
21217591 21217776 30473 31720 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 30549 30582 - misc_recomb FRT CLC
2358 2429 30590 30661 - cds BLRP CLC
2337 2357 30662 30682 - cds TEV CLC
2313 2336 30683 30706 - cds Precision cut site CLC
2271 2312 30707 30748 - cds V5 CLC
1548 2264 30755 31471 - cds SGFP CLC
1482 1541 31478 31537 - cds 2xTY1 CLC
dmel-5.43-X
21217777 21217983 31721 31927 - intron coding_transcript
21217984 21218459 31928 32403 - exon coding_transcript
21217984 21218459 31928 32403 - cds coding_transcript
21218460 21218557 32404 32501 - intron coding_transcript
21218558 21218960 32502 32904 - exon coding_transcript
21218558 21218960 32502 32904 - cds coding_transcript
21218961 21219028 32905 32972 - intron coding_transcript
21219029 21219731 32973 33675 - exon coding_transcript
21219029 21219731 32973 33675 - cds coding_transcript
21219732 21220332 33676 34276 - intron coding_transcript
21220333 21220866 34277 34810 - exon coding_transcript
21220333 21220778 34277 34722 - cds coding_transcript
21220779 21220866 34723 34810 - five_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
pen[30475]::S000169_fly_pretag_rev
TTATTGTATTTTAAAATGTTAGGTCTTGTCTAGGCTAGAAGCGTTTCTCActtgtcgtcgtcatccttgtagtca
 fasta Fasta
pen[30475]::S000169_fly_pretag_fwd
GTAAGACGCCCGGAGCCAAGCTACTGGCCGCCAAACTGGACATTGGCAAAgaagtgcataccaatcaggacccgc
 fasta Fasta