Clone: 8137439615386962 H06

Tagged gene: borr
Identifier: FBgn0032105

Clone FlyFos020910(pRedFlp-Hgr)(borr[36547]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
9250088 9251042 34955 35909 - gene aust coding_transcript
9251472 9253116 36339 39045 - gene borr coding_transcript
9251472 9253116 36339 39045 - mrna FBtr0079818 coding_transcript
9251472 9253113 36339 39042 - mrna FBtr0079817 coding_transcript
9251472 9251876 36339 37805 - exon coding_transcript
9251472 9251876 36339 37805 - exon coding_transcript
9251472 9251677 36339 36544 - three_prime_utr coding_transcript
9251472 9251677 36339 36544 - three_prime_utr coding_transcript
9251678 9251876 36545 37805 - cds coding_transcript
9251678 9251876 36545 37805 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 36621 36654 - misc_recomb FRT CLC
2358 2429 36662 36733 - cds BLRP CLC
2337 2357 36734 36754 - cds TEV CLC
2313 2336 36755 36778 - cds Precision cut site CLC
2271 2312 36779 36820 - cds V5 CLC
1548 2264 36827 37543 - cds SGFP CLC
1482 1541 37550 37609 - cds 2xTY1 CLC
dmel-5.43-2L
9251877 9251941 37806 37870 - intron coding_transcript
9251877 9251941 37806 37870 - intron coding_transcript
9251942 9252350 37871 38279 - exon coding_transcript
9251942 9252350 37871 38279 - cds coding_transcript
9251942 9252338 37871 38267 - exon coding_transcript
9251942 9252338 37871 38267 - cds coding_transcript
9252339 9252634 38268 38563 - intron coding_transcript
9252351 9252634 38280 38563 - intron coding_transcript
9252635 9253116 38564 39045 - exon coding_transcript
9252635 9253113 38564 39042 - exon coding_transcript
9252635 9252986 38564 38915 - cds coding_transcript
9252635 9252986 38564 38915 - cds coding_transcript
9252987 9253116 38916 39045 - five_prime_utr coding_transcript
9252987 9253113 38916 39042 - five_prime_utr coding_transcript
9253037 9253043 38966 38972 + exon coding_transcript
9253037 9253043 38966 38972 + five_prime_utr coding_transcript
9254076 9254854 40005 40783 - gene lectin-30A coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
borr[36547]::S000169_fly_pretag_rev
AAATATATGATATAGCATTATATCTAGATAAGCGTTTGAAATGACAGCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
borr[36547]::S000169_fly_pretag_fwd
ACGAGAACTTGCAGATGATTGTTAATAAGGCCAGCCAGGCGGTGTTCAAGgaagtgcataccaatcaggacccgc
 fasta Fasta