Clone: 8137439615386962 F06
Tagged gene: Pof
Identifier: FBgn0035047
| Clone | FlyFos020890(pRedFlp-Hgr)(Pof[25208]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2R | ||||||||
| 20556901 | 20559041 | 24919 | 28121 | - | gene | Pof | coding_transcript | |
| 20556901 | 20559041 | 24919 | 28121 | - | mrna | FBtr0072327 | coding_transcript | |
| 20558621 | 20559041 | 24919 | 26401 | - | exon | coding_transcript | ||
| 20558755 | 20559041 | 24919 | 25205 | - | three_prime_utr | coding_transcript | ||
| 20556901 | 20558828 | 25132 | 28121 | - | mrna | FBtr0306655 | coding_transcript | |
| 20556939 | 20558828 | 25132 | 28083 | - | mrna | FBtr0072328 | coding_transcript | |
| 20558621 | 20558828 | 25132 | 26401 | - | exon | coding_transcript | ||
| 20558621 | 20558828 | 25132 | 26401 | - | exon | coding_transcript | ||
| 20558755 | 20558828 | 25132 | 25205 | - | three_prime_utr | coding_transcript | ||
| 20558755 | 20558828 | 25132 | 25205 | - | three_prime_utr | coding_transcript | ||
| 20558621 | 20558754 | 25206 | 26401 | - | cds | coding_transcript | ||
| 20558621 | 20558754 | 25206 | 26401 | - | cds | coding_transcript | ||
| 20558621 | 20558754 | 25206 | 26401 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 25282 | 25315 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 25323 | 25394 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 25395 | 25415 | - | cds | TEV | CLC | |
| 2313 | 2336 | 25416 | 25439 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 25440 | 25481 | - | cds | V5 | CLC | |
| 1548 | 2264 | 25488 | 26204 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 26211 | 26270 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2R | ||||||||
| 20558563 | 20558620 | 26402 | 26459 | - | intron | coding_transcript | ||
| 20558563 | 20558620 | 26402 | 26459 | - | intron | coding_transcript | ||
| 20558563 | 20558620 | 26402 | 26459 | - | intron | coding_transcript | ||
| 20558371 | 20558562 | 26460 | 26651 | - | exon | coding_transcript | ||
| 20558371 | 20558562 | 26460 | 26651 | - | cds | coding_transcript | ||
| 20558371 | 20558562 | 26460 | 26651 | - | exon | coding_transcript | ||
| 20558371 | 20558562 | 26460 | 26651 | - | cds | coding_transcript | ||
| 20558371 | 20558562 | 26460 | 26651 | - | exon | coding_transcript | ||
| 20558371 | 20558562 | 26460 | 26651 | - | cds | coding_transcript | ||
| 20558310 | 20558370 | 26652 | 26712 | - | intron | coding_transcript | ||
| 20558310 | 20558370 | 26652 | 26712 | - | intron | coding_transcript | ||
| 20558310 | 20558370 | 26652 | 26712 | - | intron | coding_transcript | ||
| 20557425 | 20558309 | 26713 | 27597 | - | exon | coding_transcript | ||
| 20557425 | 20558309 | 26713 | 27597 | - | cds | coding_transcript | ||
| 20557425 | 20558309 | 26713 | 27597 | - | exon | coding_transcript | ||
| 20557425 | 20558309 | 26713 | 27597 | - | cds | coding_transcript | ||
| 20557425 | 20558309 | 26713 | 27597 | - | exon | coding_transcript | ||
| 20557425 | 20558309 | 26713 | 27597 | - | cds | coding_transcript | ||
| 20557371 | 20557424 | 27598 | 27651 | - | intron | coding_transcript | ||
| 20557371 | 20557424 | 27598 | 27651 | - | intron | coding_transcript | ||
| 20557371 | 20557424 | 27598 | 27651 | - | intron | coding_transcript | ||
| 20556939 | 20557370 | 27652 | 28083 | - | exon | coding_transcript | ||
| 20557047 | 20557370 | 27652 | 27975 | - | exon | coding_transcript | ||
| 20557051 | 20557370 | 27652 | 27971 | - | exon | coding_transcript | ||
| 20557094 | 20557370 | 27652 | 27928 | - | cds | coding_transcript | ||
| 20557094 | 20557370 | 27652 | 27928 | - | cds | coding_transcript | ||
| 20557094 | 20557370 | 27652 | 27928 | - | cds | coding_transcript | ||
| 20556939 | 20557093 | 27929 | 28083 | - | five_prime_utr | coding_transcript | ||
| 20557047 | 20557093 | 27929 | 27975 | - | five_prime_utr | coding_transcript | ||
| 20557051 | 20557093 | 27929 | 27971 | - | five_prime_utr | coding_transcript | ||
| 20556998 | 20557050 | 27972 | 28024 | - | intron | coding_transcript | ||
| 20556998 | 20557046 | 27976 | 28024 | - | intron | coding_transcript | ||
| 20556901 | 20556997 | 28025 | 28121 | - | exon | coding_transcript | ||
| 20556901 | 20556997 | 28025 | 28121 | - | five_prime_utr | coding_transcript | ||
| 20556901 | 20556997 | 28025 | 28121 | - | exon | coding_transcript | ||
| 20556901 | 20556997 | 28025 | 28121 | - | five_prime_utr | coding_transcript | ||
| 20555934 | 20556853 | 28169 | 29088 | + | gene | CG33228 | coding_transcript | |
| 20553681 | 20555853 | 29169 | 31341 | + | gene | CG4806 | coding_transcript | |
| 20552950 | 20553543 | 31479 | 32072 | + | gene | CG34214 | coding_transcript | |
| 20551921 | 20552962 | 32060 | 33101 | - | gene | CG3683 | coding_transcript | |
| 20551055 | 20551880 | 33142 | 33967 | + | gene | CG30161 | coding_transcript | |
| 20550374 | 20550929 | 34093 | 34648 | + | gene | Cpr60D | coding_transcript | |
| 20549047 | 20549940 | 35082 | 35975 | - | gene | CG3663 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Pof[25208]::S000169_fly_pretag_rev
TCTAATTCGTCTACGACGAGTAATTTGGTACACTGTAGCATGACAGATTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Pof[25208]::S000169_fly_pretag_fwd
ATGACAGACTTGAGGAGCTCTATGCTCAACTGGAACGCGATCCTGATCCTgaagtgcataccaatcaggacccgc
|
Fasta
|