Clone: 8137439615386962 B06

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	good	[view]

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-3R
21319281	21320883	17008	18610	+	gene	CG33494	coding_transcript
21317212	21318985	18906	20679	-	gene	CG5112	coding_transcript
21311340	21314810	23081	26551	+	gene	Dhap-at	coding_transcript
21309030	21311577	26314	28861	-	gene	CG5116	coding_transcript
21308888	21309254	28637	29003	-	gene	CG42488	coding_transcript
21303590	21308549	29342	35363	+	gene	XNP	coding_transcript
21303590	21308549	29342	35363	+	mrna	FBtr0084837	coding_transcript
21303590	21308549	29342	35363	+	mrna	FBtr0084838	coding_transcript
21306108	21308549	29342	31783	+	exon		coding_transcript
21308068	21308549	29342	29823	+	five_prime_utr		coding_transcript
21308426	21308549	29342	29465	+	exon		coding_transcript
21308426	21308549	29342	29465	+	five_prime_utr		coding_transcript
21308106	21308425	29466	29785	+	intron		coding_transcript
21306108	21308105	29786	31783	+	exon		coding_transcript
21308068	21308105	29786	29823	+	five_prime_utr		coding_transcript
21306108	21308067	29824	31783	+	cds		coding_transcript
21306108	21308067	29824	31783	+	cds		coding_transcript
21306010	21306107	31784	31881	+	intron		coding_transcript
21306010	21306107	31784	31881	+	intron		coding_transcript
21305128	21306009	31882	32763	+	exon		coding_transcript
21305128	21306009	31882	32763	+	cds		coding_transcript
21305128	21306009	31882	32763	+	exon		coding_transcript
21305128	21306009	31882	32763	+	cds		coding_transcript
21305072	21305127	32764	32819	+	intron		coding_transcript
21305072	21305127	32764	32819	+	intron		coding_transcript
21303590	21305071	32820	35363	+	exon		coding_transcript
21303590	21305071	32820	35363	+	exon		coding_transcript
21303978	21305071	32820	34975	+	cds		coding_transcript
21303978	21305071	32820	34975	+	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482	1541	33911	33970	+	cds	2xTY1	CLC
1548	2264	33977	34693	+	cds	SGFP	CLC
2271	2312	34700	34741	+	cds	V5	CLC
2313	2336	34742	34765	+	cds	Precision cut site	CLC
2337	2357	34766	34786	+	cds	TEV	CLC
2358	2429	34787	34858	+	cds	BLRP	CLC
3813	3846	34866	34899	+	misc_recomb	FRT	CLC
dmel-5.43-3R
21303590	21303977	34976	35363	+	three_prime_utr		coding_transcript
21303590	21303977	34976	35363	+	three_prime_utr		coding_transcript
21302725	21303467	35486	36228	-	gene	MED28	coding_transcript
21301358	21302637	36316	37595	+	gene	CG4553	coding_transcript
21299238	21301478	37475	39715	-	gene	Vps33B	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
XNP[33910]::S000169_fly_pretag_rev GATTAAATTAAAGGGTGTAACCACGGCATTGGTTCGATTCGGGTATTTTActtgtcgtcgtcatccttgtagtca	Fasta
XNP[33910]::S000169_fly_pretag_fwd CGGCAGCACCTGCTCCGGGCTTTGAACCGGATAAGGTATACGAGATCGACgaagtgcataccaatcaggacccgc	Fasta