Clone: 8137439615386962 A06
Tagged gene: HisCl1
Identifier: FBgn0037950
| Clone | FlyFos020750(pRedFlp-Hgr)(HisCl1[14980]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 7612898 | 7615115 | 14817 | 18096 | - | gene | HisCl1 | coding_transcript | |
| 7612898 | 7615115 | 14817 | 18096 | - | mrna | FBtr0082470 | coding_transcript | |
| 7614796 | 7615115 | 14817 | 16198 | - | exon | coding_transcript | ||
| 7614955 | 7615115 | 14817 | 14977 | - | three_prime_utr | coding_transcript | ||
| 7612898 | 7615080 | 14852 | 18096 | - | mrna | FBtr0082471 | coding_transcript | |
| 7612934 | 7615080 | 14852 | 18060 | - | mrna | FBtr0301826 | coding_transcript | |
| 7613152 | 7615080 | 14852 | 17842 | - | mrna | FBtr0082472 | coding_transcript | |
| 7614808 | 7615080 | 14852 | 16186 | - | exon | coding_transcript | ||
| 7614808 | 7615080 | 14852 | 16186 | - | exon | coding_transcript | ||
| 7614808 | 7615080 | 14852 | 16186 | - | exon | coding_transcript | ||
| 7614808 | 7615080 | 14852 | 16186 | - | three_prime_utr | coding_transcript | ||
| 7614955 | 7615080 | 14852 | 14977 | - | three_prime_utr | coding_transcript | ||
| 7614955 | 7615080 | 14852 | 14977 | - | three_prime_utr | coding_transcript | ||
| 7614796 | 7614954 | 14978 | 16198 | - | cds | coding_transcript | ||
| 7614808 | 7614954 | 14978 | 16186 | - | cds | coding_transcript | ||
| 7614808 | 7614954 | 14978 | 16186 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 15054 | 15087 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 15095 | 15166 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 15167 | 15187 | - | cds | TEV | CLC | |
| 2313 | 2336 | 15188 | 15211 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 15212 | 15253 | - | cds | V5 | CLC | |
| 1548 | 2264 | 15260 | 15976 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 15983 | 16042 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 7614744 | 7614807 | 16187 | 16250 | - | intron | coding_transcript | ||
| 7614744 | 7614807 | 16187 | 16250 | - | intron | coding_transcript | ||
| 7614744 | 7614807 | 16187 | 16250 | - | intron | coding_transcript | ||
| 7614744 | 7614795 | 16199 | 16250 | - | intron | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | exon | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | cds | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | exon | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | cds | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | exon | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | cds | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | exon | coding_transcript | ||
| 7614364 | 7614743 | 16251 | 16630 | - | three_prime_utr | coding_transcript | ||
| 7614303 | 7614363 | 16631 | 16691 | - | intron | coding_transcript | ||
| 7614303 | 7614363 | 16631 | 16691 | - | intron | coding_transcript | ||
| 7614303 | 7614363 | 16631 | 16691 | - | intron | coding_transcript | ||
| 7614303 | 7614363 | 16631 | 16691 | - | intron | coding_transcript | ||
| 7613744 | 7614302 | 16692 | 17250 | - | exon | coding_transcript | ||
| 7614149 | 7614302 | 16692 | 16845 | - | three_prime_utr | coding_transcript | ||
| 7614168 | 7614302 | 16692 | 16826 | - | exon | coding_transcript | ||
| 7614168 | 7614302 | 16692 | 16826 | - | cds | coding_transcript | ||
| 7614168 | 7614302 | 16692 | 16826 | - | exon | coding_transcript | ||
| 7614168 | 7614302 | 16692 | 16826 | - | cds | coding_transcript | ||
| 7614186 | 7614302 | 16692 | 16808 | - | exon | coding_transcript | ||
| 7614186 | 7614302 | 16692 | 16808 | - | cds | coding_transcript | ||
| 7614054 | 7614185 | 16809 | 16940 | - | intron | coding_transcript | ||
| 7614054 | 7614167 | 16827 | 16940 | - | intron | coding_transcript | ||
| 7614054 | 7614167 | 16827 | 16940 | - | intron | coding_transcript | ||
| 7613744 | 7614148 | 16846 | 17250 | - | cds | coding_transcript | ||
| 7613744 | 7614053 | 16941 | 17250 | - | exon | coding_transcript | ||
| 7613744 | 7614053 | 16941 | 17250 | - | cds | coding_transcript | ||
| 7613744 | 7614053 | 16941 | 17250 | - | exon | coding_transcript | ||
| 7613744 | 7614053 | 16941 | 17250 | - | cds | coding_transcript | ||
| 7613744 | 7614053 | 16941 | 17250 | - | exon | coding_transcript | ||
| 7613744 | 7614053 | 16941 | 17250 | - | cds | coding_transcript | ||
| 7613671 | 7613743 | 17251 | 17323 | - | intron | coding_transcript | ||
| 7613671 | 7613743 | 17251 | 17323 | - | intron | coding_transcript | ||
| 7613671 | 7613743 | 17251 | 17323 | - | intron | coding_transcript | ||
| 7613671 | 7613743 | 17251 | 17323 | - | intron | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | exon | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | cds | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | exon | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | cds | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | exon | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | cds | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | exon | coding_transcript | ||
| 7613487 | 7613670 | 17324 | 17507 | - | cds | coding_transcript | ||
| 7613417 | 7613486 | 17508 | 17577 | - | intron | coding_transcript | ||
| 7613417 | 7613486 | 17508 | 17577 | - | intron | coding_transcript | ||
| 7613417 | 7613486 | 17508 | 17577 | - | intron | coding_transcript | ||
| 7613417 | 7613486 | 17508 | 17577 | - | intron | coding_transcript | ||
| 7613099 | 7613416 | 17578 | 17895 | - | exon | coding_transcript | ||
| 7613099 | 7613416 | 17578 | 17895 | - | exon | coding_transcript | ||
| 7613099 | 7613416 | 17578 | 17895 | - | exon | coding_transcript | ||
| 7613152 | 7613416 | 17578 | 17842 | - | exon | coding_transcript | ||
| 7613304 | 7613416 | 17578 | 17690 | - | cds | coding_transcript | ||
| 7613304 | 7613416 | 17578 | 17690 | - | cds | coding_transcript | ||
| 7613304 | 7613416 | 17578 | 17690 | - | cds | coding_transcript | ||
| 7613304 | 7613416 | 17578 | 17690 | - | cds | coding_transcript | ||
| 7613099 | 7613303 | 17691 | 17895 | - | five_prime_utr | coding_transcript | ||
| 7613099 | 7613303 | 17691 | 17895 | - | five_prime_utr | coding_transcript | ||
| 7613099 | 7613303 | 17691 | 17895 | - | five_prime_utr | coding_transcript | ||
| 7613152 | 7613303 | 17691 | 17842 | - | five_prime_utr | coding_transcript | ||
| 7613009 | 7613098 | 17896 | 17985 | - | intron | coding_transcript | ||
| 7613009 | 7613098 | 17896 | 17985 | - | intron | coding_transcript | ||
| 7613009 | 7613098 | 17896 | 17985 | - | intron | coding_transcript | ||
| 7612898 | 7613008 | 17986 | 18096 | - | exon | coding_transcript | ||
| 7612898 | 7613008 | 17986 | 18096 | - | five_prime_utr | coding_transcript | ||
| 7612898 | 7613008 | 17986 | 18096 | - | exon | coding_transcript | ||
| 7612898 | 7613008 | 17986 | 18096 | - | five_prime_utr | coding_transcript | ||
| 7612934 | 7613008 | 17986 | 18060 | - | exon | coding_transcript | ||
| 7612934 | 7613008 | 17986 | 18060 | - | five_prime_utr | coding_transcript | ||
| 7606851 | 7612736 | 18258 | 24143 | + | gene | CG17360 | coding_transcript | |
| 7590760 | 7604886 | 26108 | 40234 | + | gene | l(3)neo38 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
HisCl1[14980]::S000169_fly_pretag_fwd
TCCCGTTTTCGTTCTTTATACTCAATATTGTCTATTGGACAACGTTCCTAgaagtgcataccaatcaggacccgc
|
Fasta
|
|
HisCl1[14980]::S000169_fly_pretag_rev
ATTATTATTGTTTACGCTCTATTCCTTCGGAGAAACTTTTCCATCCATCActtgtcgtcgtcatccttgtagtca
|
Fasta
|