Clone: 8137439615386962 B05
Tagged gene: Mkp3
Identifier: FBgn0036844
| Clone | FlyFos020625(pRedFlp-Hgr)(Mkp3[37702]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 19087990 | 19089326 | 10391 | 11727 | + | gene | CG11577 | coding_transcript | |
| 19085772 | 19087860 | 11857 | 13945 | - | gene | MESR6 | coding_transcript | |
| 19060832 | 19079522 | 20195 | 39947 | + | gene | Mkp3 | coding_transcript | |
| 19061467 | 19079522 | 20195 | 39312 | + | mrna | FBtr0075035 | coding_transcript | |
| 19078421 | 19079522 | 20195 | 21296 | + | exon | coding_transcript | ||
| 19078824 | 19079522 | 20195 | 20893 | + | five_prime_utr | coding_transcript | ||
| 19078421 | 19078823 | 20894 | 21296 | + | cds | coding_transcript | ||
| 19063200 | 19078420 | 21297 | 36517 | + | intron | coding_transcript | ||
| 19060832 | 19065496 | 34221 | 39947 | + | mrna | FBtr0075036 | coding_transcript | |
| 19065457 | 19065496 | 34221 | 34260 | + | exon | coding_transcript | ||
| 19065457 | 19065496 | 34221 | 34260 | + | five_prime_utr | coding_transcript | ||
| 19063200 | 19065456 | 34261 | 36517 | + | intron | coding_transcript | ||
| 19063082 | 19063199 | 36518 | 36635 | + | exon | coding_transcript | ||
| 19063082 | 19063199 | 36518 | 36635 | + | exon | coding_transcript | ||
| 19063082 | 19063199 | 36518 | 36635 | + | cds | coding_transcript | ||
| 19063093 | 19063199 | 36518 | 36624 | + | five_prime_utr | coding_transcript | ||
| 19063082 | 19063092 | 36625 | 36635 | + | cds | coding_transcript | ||
| 19062990 | 19063081 | 36636 | 36727 | + | intron | coding_transcript | ||
| 19062990 | 19063081 | 36636 | 36727 | + | intron | coding_transcript | ||
| 19062782 | 19062989 | 36728 | 36935 | + | exon | coding_transcript | ||
| 19062782 | 19062989 | 36728 | 36935 | + | cds | coding_transcript | ||
| 19062782 | 19062989 | 36728 | 36935 | + | exon | coding_transcript | ||
| 19062782 | 19062989 | 36728 | 36935 | + | cds | coding_transcript | ||
| 19062723 | 19062781 | 36936 | 36994 | + | intron | coding_transcript | ||
| 19062723 | 19062781 | 36936 | 36994 | + | intron | coding_transcript | ||
| 19062587 | 19062722 | 36995 | 37130 | + | exon | coding_transcript | ||
| 19062587 | 19062722 | 36995 | 37130 | + | cds | coding_transcript | ||
| 19062587 | 19062722 | 36995 | 37130 | + | exon | coding_transcript | ||
| 19062587 | 19062722 | 36995 | 37130 | + | cds | coding_transcript | ||
| 19062383 | 19062586 | 37131 | 37334 | + | intron | coding_transcript | ||
| 19062383 | 19062586 | 37131 | 37334 | + | intron | coding_transcript | ||
| 19060832 | 19062382 | 37335 | 39947 | + | exon | coding_transcript | ||
| 19061467 | 19062382 | 37335 | 39312 | + | exon | coding_transcript | ||
| 19062012 | 19062382 | 37335 | 38767 | + | cds | coding_transcript | ||
| 19062012 | 19062382 | 37335 | 38767 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 37703 | 37762 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 37769 | 38485 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 38492 | 38533 | + | cds | V5 | CLC | |
| 2313 | 2336 | 38534 | 38557 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 38558 | 38578 | + | cds | TEV | CLC | |
| 2358 | 2429 | 38579 | 38650 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 38658 | 38691 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-3L | ||||||||
| 19060832 | 19062011 | 38768 | 39947 | + | three_prime_utr | coding_transcript | ||
| 19061467 | 19062011 | 38768 | 39312 | + | three_prime_utr | coding_transcript | ||
| 19056272 | 19059249 | 41530 | 44507 | - | gene | CG6812 | coding_transcript | |
| 19052869 | 19055902 | 44877 | 47910 | + | gene | CG3797 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Mkp3[37702]::S000169_fly_pretag_rev
ACCTCCTGACTTGGTGGTAGCACGAAACTCTTACCGCCACTCTGTTCTCActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Mkp3[37702]::S000169_fly_pretag_fwd
ACTCCGGCATCGAGTTCGATCGCTGGACCCCGTCGGACACGGGTCTTAAAgaagtgcataccaatcaggacccgc
|
Fasta
|