Clone: 8137439615386962 D04
Tagged gene: su(r)
Identifier: FBgn0086450
| Clone | FlyFos020486(pRedFlp-Hgr)(su(r)[24197]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-X | ||||||||
| 9100153 | 9104580 | 10544 | 14971 | + | gene | CG12119 | coding_transcript | |
| 9090839 | 9096770 | 18354 | 25347 | + | gene | su(r) | coding_transcript | |
| 9090839 | 9096770 | 18354 | 25347 | + | mrna | FBtr0071337 | coding_transcript | |
| 9096597 | 9096770 | 18354 | 18527 | + | exon | coding_transcript | ||
| 9096597 | 9096770 | 18354 | 18527 | + | five_prime_utr | coding_transcript | ||
| 9094230 | 9096596 | 18528 | 20894 | + | intron | coding_transcript | ||
| 9090839 | 9095849 | 19275 | 25347 | + | mrna | FBtr0071338 | coding_transcript | |
| 9095653 | 9095849 | 19275 | 19471 | + | exon | coding_transcript | ||
| 9095653 | 9095849 | 19275 | 19471 | + | five_prime_utr | coding_transcript | ||
| 9094230 | 9095652 | 19472 | 20894 | + | intron | coding_transcript | ||
| 9094166 | 9094229 | 20895 | 20958 | + | exon | coding_transcript | ||
| 9094166 | 9094229 | 20895 | 20958 | + | exon | coding_transcript | ||
| 9094211 | 9094229 | 20895 | 20913 | + | five_prime_utr | coding_transcript | ||
| 9094211 | 9094229 | 20895 | 20913 | + | five_prime_utr | coding_transcript | ||
| 9094166 | 9094210 | 20914 | 20958 | + | cds | coding_transcript | ||
| 9094166 | 9094210 | 20914 | 20958 | + | cds | coding_transcript | ||
| 9094107 | 9094165 | 20959 | 21017 | + | intron | coding_transcript | ||
| 9094107 | 9094165 | 20959 | 21017 | + | intron | coding_transcript | ||
| 9091302 | 9094106 | 21018 | 23822 | + | exon | coding_transcript | ||
| 9091302 | 9094106 | 21018 | 23822 | + | cds | coding_transcript | ||
| 9091302 | 9094106 | 21018 | 23822 | + | exon | coding_transcript | ||
| 9091302 | 9094106 | 21018 | 23822 | + | cds | coding_transcript | ||
| 9091244 | 9091301 | 23823 | 23880 | + | intron | coding_transcript | ||
| 9091244 | 9091301 | 23823 | 23880 | + | intron | coding_transcript | ||
| 9091086 | 9091243 | 23881 | 24038 | + | exon | coding_transcript | ||
| 9091086 | 9091243 | 23881 | 24038 | + | cds | coding_transcript | ||
| 9091086 | 9091243 | 23881 | 24038 | + | exon | coding_transcript | ||
| 9091086 | 9091243 | 23881 | 24038 | + | cds | coding_transcript | ||
| 9091012 | 9091085 | 24039 | 24112 | + | intron | coding_transcript | ||
| 9091012 | 9091085 | 24039 | 24112 | + | intron | coding_transcript | ||
| 9090839 | 9091011 | 24113 | 25347 | + | exon | coding_transcript | ||
| 9090839 | 9091011 | 24113 | 25347 | + | exon | coding_transcript | ||
| 9090924 | 9091011 | 24113 | 25262 | + | cds | coding_transcript | ||
| 9090924 | 9091011 | 24113 | 25262 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 24198 | 24257 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 24264 | 24980 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 24987 | 25028 | + | cds | V5 | CLC | |
| 2313 | 2336 | 25029 | 25052 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 25053 | 25073 | + | cds | TEV | CLC | |
| 2358 | 2429 | 25074 | 25145 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 25153 | 25186 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-X | ||||||||
| 9090839 | 9090923 | 25263 | 25347 | + | three_prime_utr | coding_transcript | ||
| 9090839 | 9090923 | 25263 | 25347 | + | three_prime_utr | coding_transcript | ||
| 9088775 | 9090494 | 25692 | 27411 | + | gene | CG12118 | coding_transcript | |
| 9087975 | 9089382 | 26804 | 28211 | - | gene | CG12106 | coding_transcript | |
| 9086702 | 9087660 | 28526 | 29484 | - | gene | CG12056 | coding_transcript | |
| 9085706 | 9086582 | 29604 | 30480 | - | gene | CG12057 | coding_transcript | |
| 9083356 | 9084614 | 31572 | 32830 | + | gene | CG12115 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
su(r)[24197]::S000169_fly_pretag_fwd
GAGGAGTCGAGGAGAAGATCTTCTACACCCACGCTCTCAGCCAGTGCCAGgaagtgcataccaatcaggacccgc
|
Fasta
|
|
su(r)[24197]::S000169_fly_pretag_rev
CATAGATTGGAATTTACTATCGGTATTTCGCGTAGAACTAGGGACTTTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|