Clone: 8137439615386962 G01
Tagged gene: Lis-1
Identifier: FBgn0015754
| Clone | FlyFos019981(pRedFlp-Hgr)(Lis-1[23477]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2R | ||||||||
| 12081562 | 12083807 | 10849 | 13094 | + | gene | calypso | coding_transcript | |
| 12074090 | 12081754 | 12902 | 20566 | - | gene | clu | coding_transcript | |
| 12072627 | 12074011 | 20645 | 22029 | + | gene | CG8441 | coding_transcript | |
| 12066309 | 12072608 | 22048 | 29409 | - | gene | Lis-1 | coding_transcript | |
| 12066309 | 12072608 | 22048 | 29409 | - | mrna | FBtr0087236 | coding_transcript | |
| 12066309 | 12072608 | 22048 | 29409 | - | mrna | FBtr0087237 | coding_transcript | |
| 12066309 | 12072608 | 22048 | 29409 | - | mrna | FBtr0087238 | coding_transcript | |
| 12066309 | 12072608 | 22048 | 29409 | - | mrna | FBtr0087239 | coding_transcript | |
| 12066838 | 12072608 | 22048 | 28880 | - | mrna | FBtr0087240 | coding_transcript | |
| 12068754 | 12072608 | 22048 | 26964 | - | mrna | FBtr0087241 | coding_transcript | |
| 12071108 | 12072608 | 22048 | 24610 | - | exon | coding_transcript | ||
| 12071108 | 12072608 | 22048 | 24610 | - | exon | coding_transcript | ||
| 12071108 | 12072608 | 22048 | 24610 | - | exon | coding_transcript | ||
| 12071108 | 12072608 | 22048 | 24610 | - | exon | coding_transcript | ||
| 12071108 | 12072608 | 22048 | 24610 | - | exon | coding_transcript | ||
| 12071108 | 12072608 | 22048 | 24610 | - | exon | coding_transcript | ||
| 12071182 | 12072608 | 22048 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12071182 | 12072608 | 22048 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12071182 | 12072608 | 22048 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12071182 | 12072608 | 22048 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12071182 | 12072608 | 22048 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12071182 | 12072608 | 22048 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12066309 | 12071496 | 23160 | 29409 | - | mrna | FBtr0304747 | coding_transcript | |
| 12071108 | 12071496 | 23160 | 24610 | - | exon | coding_transcript | ||
| 12071182 | 12071496 | 23160 | 23474 | - | three_prime_utr | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| 12071108 | 12071181 | 23475 | 24610 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 23551 | 23584 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 23592 | 23663 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 23664 | 23684 | - | cds | TEV | CLC | |
| 2313 | 2336 | 23685 | 23708 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 23709 | 23750 | - | cds | V5 | CLC | |
| 1548 | 2264 | 23757 | 24473 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 24480 | 24539 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2R | ||||||||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12071043 | 12071107 | 24611 | 24675 | - | intron | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | exon | coding_transcript | ||
| 12070691 | 12071042 | 24676 | 25027 | - | cds | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070624 | 12070690 | 25028 | 25094 | - | intron | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | exon | coding_transcript | ||
| 12070488 | 12070623 | 25095 | 25230 | - | cds | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070420 | 12070487 | 25231 | 25298 | - | intron | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | exon | coding_transcript | ||
| 12070242 | 12070419 | 25299 | 25476 | - | cds | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070179 | 12070241 | 25477 | 25539 | - | intron | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | exon | coding_transcript | ||
| 12070022 | 12070178 | 25540 | 25696 | - | cds | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069964 | 12070021 | 25697 | 25754 | - | intron | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | exon | coding_transcript | ||
| 12069663 | 12069963 | 25755 | 26055 | - | cds | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069596 | 12069662 | 26056 | 26122 | - | intron | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069486 | 12069595 | 26123 | 26232 | - | exon | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069558 | 12069595 | 26123 | 26160 | - | cds | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12069486 | 12069557 | 26161 | 26232 | - | five_prime_utr | coding_transcript | ||
| 12066383 | 12069485 | 26233 | 29335 | - | intron | coding_transcript | ||
| 12066458 | 12069485 | 26233 | 29260 | - | intron | coding_transcript | ||
| 12066458 | 12069485 | 26233 | 29260 | - | intron | coding_transcript | ||
| 12066878 | 12069485 | 26233 | 28840 | - | intron | coding_transcript | ||
| 12069311 | 12069485 | 26233 | 26407 | - | intron | coding_transcript | ||
| 12069311 | 12069485 | 26233 | 26407 | - | intron | coding_transcript | ||
| 12069311 | 12069485 | 26233 | 26407 | - | intron | coding_transcript | ||
| 12068754 | 12069310 | 26408 | 26964 | - | exon | coding_transcript | ||
| 12068754 | 12069310 | 26408 | 26964 | - | five_prime_utr | coding_transcript | ||
| 12069071 | 12069310 | 26408 | 26647 | - | exon | coding_transcript | ||
| 12069071 | 12069310 | 26408 | 26647 | - | five_prime_utr | coding_transcript | ||
| 12069283 | 12069310 | 26408 | 26435 | - | exon | coding_transcript | ||
| 12069283 | 12069310 | 26408 | 26435 | - | five_prime_utr | coding_transcript | ||
| 12066458 | 12069282 | 26436 | 29260 | - | intron | coding_transcript | ||
| 12066458 | 12069070 | 26648 | 29260 | - | intron | coding_transcript | ||
| 12066838 | 12066877 | 28841 | 28880 | - | exon | coding_transcript | ||
| 12066838 | 12066877 | 28841 | 28880 | - | five_prime_utr | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | exon | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | five_prime_utr | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | exon | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | five_prime_utr | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | exon | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | five_prime_utr | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | exon | coding_transcript | ||
| 12066309 | 12066457 | 29261 | 29409 | - | five_prime_utr | coding_transcript | ||
| 12066309 | 12066382 | 29336 | 29409 | - | exon | coding_transcript | ||
| 12066309 | 12066382 | 29336 | 29409 | - | five_prime_utr | coding_transcript | ||
| 12058747 | 12065812 | 29906 | 36971 | + | gene | Ptp52F | coding_transcript | |
| 12057105 | 12058365 | 37353 | 38613 | + | gene | CG8435 | coding_transcript | |
| 12044772 | 12046299 | 49419 | 50946 | + | gene | CG10734 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Lis-1[23477]::S000169_fly_pretag_rev
TGTTTAAATTGAGAAGTAAGCAGAACCCTTGCCGATTCTTCCTTAATTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Lis-1[23477]::S000169_fly_pretag_fwd
ACGTAATTAGCGGTAGCGTAGATCAAACAGTAAAGGTCTGGGAATGTCGTgaagtgcataccaatcaggacccgc
|
Fasta
|