Clone: 3861840049532044 D10

Tagged gene: n-syb
Identifier: FBgn0013342

Clone FlyFos017600(pRedFlp-Hgr)(n-syb[25079]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
1645931 1647464 9885 11418 + gene CG17249 coding_transcript
1645467 1645983 11366 11882 - gene CG13919 coding_transcript
1641066 1645235 12114 16283 + gene alphaCop coding_transcript
1639687 1640952 16397 17662 - gene Bgb coding_transcript
1637942 1639234 18115 19407 + gene metl coding_transcript
1630348 1637767 19582 28063 + gene n-syb coding_transcript
1630348 1637767 19582 28063 + mrna FBtr0300894 coding_transcript
1631910 1637767 19582 26501 + mrna FBtr0072815 coding_transcript
1631910 1637767 19582 26501 + mrna FBtr0072819 coding_transcript
1632193 1637767 19582 26218 + mrna FBtr0300893 coding_transcript
1632193 1637767 19582 26218 + mrna FBtr0302310 coding_transcript
1637723 1637767 19582 19626 + exon coding_transcript
1637723 1637767 19582 19626 + five_prime_utr coding_transcript
1637723 1637767 19582 19626 + exon coding_transcript
1637723 1637767 19582 19626 + five_prime_utr coding_transcript
1637723 1637767 19582 19626 + exon coding_transcript
1637723 1637767 19582 19626 + five_prime_utr coding_transcript
1637723 1637767 19582 19626 + exon coding_transcript
1637723 1637767 19582 19626 + five_prime_utr coding_transcript
1637723 1637767 19582 19626 + exon coding_transcript
1637723 1637767 19582 19626 + five_prime_utr coding_transcript
1630348 1637749 19600 28063 + mrna FBtr0306578 coding_transcript
1637723 1637749 19600 19626 + exon coding_transcript
1637723 1637749 19600 19626 + five_prime_utr coding_transcript
1637270 1637722 19627 20079 + intron coding_transcript
1637270 1637722 19627 20079 + intron coding_transcript
1637270 1637722 19627 20079 + intron coding_transcript
1637270 1637722 19627 20079 + intron coding_transcript
1637273 1637722 19627 20076 + intron coding_transcript
1637273 1637722 19627 20076 + intron coding_transcript
1636818 1637272 20077 20531 + exon coding_transcript
1636818 1637272 20077 20531 + five_prime_utr coding_transcript
1636818 1637272 20077 20531 + exon coding_transcript
1636820 1637272 20077 20529 + five_prime_utr coding_transcript
1636818 1637269 20080 20531 + exon coding_transcript
1636818 1637269 20080 20531 + five_prime_utr coding_transcript
1636818 1637269 20080 20531 + exon coding_transcript
1636818 1637269 20080 20531 + exon coding_transcript
1636818 1637269 20080 20531 + five_prime_utr coding_transcript
1636818 1637269 20080 20531 + exon coding_transcript
1636818 1637269 20080 20531 + five_prime_utr coding_transcript
1636820 1637269 20080 20529 + five_prime_utr coding_transcript
1636818 1636819 20530 20531 + cds coding_transcript
1636818 1636819 20530 20531 + cds coding_transcript
1635685 1636817 20532 21664 + intron coding_transcript
1635685 1636817 20532 21664 + intron coding_transcript
1636010 1636817 20532 21339 + intron coding_transcript
1636010 1636817 20532 21339 + intron coding_transcript
1636010 1636817 20532 21339 + intron coding_transcript
1636010 1636817 20532 21339 + intron coding_transcript
1635937 1636009 21340 21412 + exon coding_transcript
1635937 1636009 21340 21412 + exon coding_transcript
1635937 1636009 21340 21412 + exon coding_transcript
1635937 1636009 21340 21412 + exon coding_transcript
1635966 1636009 21340 21383 + five_prime_utr coding_transcript
1635966 1636009 21340 21383 + five_prime_utr coding_transcript
1635966 1636009 21340 21383 + five_prime_utr coding_transcript
1635966 1636009 21340 21383 + five_prime_utr coding_transcript
1635937 1635965 21384 21412 + cds coding_transcript
1635937 1635965 21384 21412 + cds coding_transcript
1635937 1635965 21384 21412 + cds coding_transcript
1635937 1635965 21384 21412 + cds coding_transcript
1635685 1635936 21413 21664 + intron coding_transcript
1635685 1635936 21413 21664 + intron coding_transcript
1635685 1635936 21413 21664 + intron coding_transcript
1635685 1635936 21413 21664 + intron coding_transcript
1635534 1635684 21665 21815 + exon coding_transcript
1635534 1635684 21665 21815 + cds coding_transcript
1635534 1635684 21665 21815 + exon coding_transcript
1635534 1635684 21665 21815 + cds coding_transcript
1635534 1635684 21665 21815 + exon coding_transcript
1635534 1635684 21665 21815 + cds coding_transcript
1635534 1635684 21665 21815 + exon coding_transcript
1635534 1635684 21665 21815 + cds coding_transcript
1635534 1635684 21665 21815 + exon coding_transcript
1635534 1635684 21665 21815 + cds coding_transcript
1635534 1635684 21665 21815 + exon coding_transcript
1635534 1635684 21665 21815 + cds coding_transcript
1635460 1635533 21816 21889 + intron coding_transcript
1635460 1635533 21816 21889 + intron coding_transcript
1635460 1635533 21816 21889 + intron coding_transcript
1635460 1635533 21816 21889 + intron coding_transcript
1635460 1635533 21816 21889 + intron coding_transcript
1635460 1635533 21816 21889 + intron coding_transcript
1635301 1635459 21890 22048 + exon coding_transcript
1635301 1635459 21890 22048 + cds coding_transcript
1635301 1635459 21890 22048 + exon coding_transcript
1635301 1635459 21890 22048 + cds coding_transcript
1635301 1635459 21890 22048 + exon coding_transcript
1635301 1635459 21890 22048 + cds coding_transcript
1635301 1635459 21890 22048 + exon coding_transcript
1635301 1635459 21890 22048 + cds coding_transcript
1635301 1635459 21890 22048 + exon coding_transcript
1635301 1635459 21890 22048 + cds coding_transcript
1635301 1635459 21890 22048 + exon coding_transcript
1635301 1635459 21890 22048 + cds coding_transcript
1635238 1635300 22049 22111 + intron coding_transcript
1635238 1635300 22049 22111 + intron coding_transcript
1635238 1635300 22049 22111 + intron coding_transcript
1635238 1635300 22049 22111 + intron coding_transcript
1635238 1635300 22049 22111 + intron coding_transcript
1635238 1635300 22049 22111 + intron coding_transcript
1635186 1635237 22112 22163 + exon coding_transcript
1635186 1635237 22112 22163 + cds coding_transcript
1635186 1635237 22112 22163 + exon coding_transcript
1635186 1635237 22112 22163 + cds coding_transcript
1635186 1635237 22112 22163 + exon coding_transcript
1635186 1635237 22112 22163 + cds coding_transcript
1635186 1635237 22112 22163 + exon coding_transcript
1635186 1635237 22112 22163 + cds coding_transcript
1635186 1635237 22112 22163 + exon coding_transcript
1635186 1635237 22112 22163 + cds coding_transcript
1635186 1635237 22112 22163 + exon coding_transcript
1635186 1635237 22112 22163 + cds coding_transcript
1632455 1635185 22164 24894 + intron coding_transcript
1632455 1635185 22164 24894 + intron coding_transcript
1632455 1635185 22164 24894 + intron coding_transcript
1632455 1635185 22164 24894 + intron coding_transcript
1633807 1635185 22164 23542 + intron coding_transcript
1633807 1635185 22164 23542 + intron coding_transcript
1633709 1633806 23543 23640 + exon coding_transcript
1633709 1633806 23543 23640 + exon coding_transcript
1633790 1633806 23543 23559 + cds coding_transcript
1633790 1633806 23543 23559 + cds coding_transcript
1633709 1633789 23560 23640 + three_prime_utr coding_transcript
1633709 1633789 23560 23640 + three_prime_utr coding_transcript
1632455 1633708 23641 24894 + intron coding_transcript
1633506 1633708 23641 23843 + intron coding_transcript
1633058 1633505 23844 24291 + exon coding_transcript
1633058 1633505 23844 24291 + three_prime_utr coding_transcript
1632455 1633057 24292 24894 + intron coding_transcript
1630348 1632454 24895 28063 + exon coding_transcript
1630348 1632454 24895 28063 + exon coding_transcript
1630348 1632454 24895 28063 + three_prime_utr coding_transcript
1631910 1632454 24895 26501 + exon coding_transcript
1631910 1632454 24895 26501 + exon coding_transcript
1632193 1632454 24895 26218 + exon coding_transcript
1632193 1632454 24895 26218 + exon coding_transcript
1632193 1632454 24895 26218 + three_prime_utr coding_transcript
1632267 1632454 24895 26144 + cds coding_transcript
1632267 1632454 24895 26144 + cds coding_transcript
1632267 1632454 24895 26144 + cds coding_transcript
1632267 1632454 24895 26144 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 25080 25139 + cds 2xTY1 CLC
1548 2264 25146 25862 + cds SGFP CLC
2271 2312 25869 25910 + cds V5 CLC
2313 2336 25911 25934 + cds Precision cut site CLC
2337 2357 25935 25955 + cds TEV CLC
2358 2429 25956 26027 + cds BLRP CLC
3813 3846 26035 26068 + misc_recomb FRT CLC
dmel-5.43-3L
1630348 1632266 26145 28063 + three_prime_utr coding_transcript
1631910 1632266 26145 26501 + three_prime_utr coding_transcript
1631910 1632266 26145 26501 + three_prime_utr coding_transcript
1632193 1632266 26145 26218 + three_prime_utr coding_transcript
1625791 1628377 30034 32620 + gene CG13928 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
n-syb[25079]::S000169_fly_pretag_rev
GAAGGAGCACACTAATCGAGAAACTTTCGTCCTGGCAGCGGGATTGCTTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
n-syb[25079]::S000169_fly_pretag_fwd
ACGGAGCAGGAGCAGGAGGATCGGCAGGAGCTGGCGATCACGGCGGCGTGgaagtgcataccaatcaggacccgc
 fasta Fasta