Clone: 3861840049532044 B04
Tagged gene: mael
Identifier: FBgn0016034
| Clone | FlyFos016495(pRedFlp-Hgr)(mael[16826]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 22722866 | 22724700 | 11341 | 13175 | - | gene | CG32454 | coding_transcript | |
| 22719334 | 22720874 | 15167 | 16707 | + | gene | CG14450 | coding_transcript | |
| 22717334 | 22719334 | 16707 | 19769 | - | gene | mael | coding_transcript | |
| 22717334 | 22719334 | 16707 | 19769 | - | mrna | FBtr0089631 | coding_transcript | |
| 22717334 | 22719334 | 16707 | 19769 | - | mrna | FBtr0089632 | coding_transcript | |
| 22717334 | 22719334 | 16707 | 19769 | - | mrna | FBtr0089633 | coding_transcript | |
| 22718705 | 22719334 | 16707 | 18398 | - | exon | coding_transcript | ||
| 22718705 | 22719334 | 16707 | 18398 | - | exon | coding_transcript | ||
| 22718705 | 22719334 | 16707 | 18398 | - | exon | coding_transcript | ||
| 22719218 | 22719334 | 16707 | 16823 | - | three_prime_utr | coding_transcript | ||
| 22719218 | 22719334 | 16707 | 16823 | - | three_prime_utr | coding_transcript | ||
| 22719218 | 22719334 | 16707 | 16823 | - | three_prime_utr | coding_transcript | ||
| 22718705 | 22719217 | 16824 | 18398 | - | cds | coding_transcript | ||
| 22718705 | 22719217 | 16824 | 18398 | - | cds | coding_transcript | ||
| 22718705 | 22719217 | 16824 | 18398 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 16900 | 16933 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 16941 | 17012 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 17013 | 17033 | - | cds | TEV | CLC | |
| 2313 | 2336 | 17034 | 17057 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 17058 | 17099 | - | cds | V5 | CLC | |
| 1548 | 2264 | 17106 | 17822 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 17829 | 17888 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3L | ||||||||
| 22718643 | 22718704 | 18399 | 18460 | - | intron | coding_transcript | ||
| 22718643 | 22718704 | 18399 | 18460 | - | intron | coding_transcript | ||
| 22718643 | 22718704 | 18399 | 18460 | - | intron | coding_transcript | ||
| 22718086 | 22718642 | 18461 | 19017 | - | exon | coding_transcript | ||
| 22718086 | 22718642 | 18461 | 19017 | - | cds | coding_transcript | ||
| 22718086 | 22718642 | 18461 | 19017 | - | exon | coding_transcript | ||
| 22718086 | 22718642 | 18461 | 19017 | - | cds | coding_transcript | ||
| 22718086 | 22718642 | 18461 | 19017 | - | exon | coding_transcript | ||
| 22718086 | 22718642 | 18461 | 19017 | - | cds | coding_transcript | ||
| 22718030 | 22718085 | 19018 | 19073 | - | intron | coding_transcript | ||
| 22718030 | 22718085 | 19018 | 19073 | - | intron | coding_transcript | ||
| 22718030 | 22718085 | 19018 | 19073 | - | intron | coding_transcript | ||
| 22717831 | 22718029 | 19074 | 19272 | - | exon | coding_transcript | ||
| 22717831 | 22718029 | 19074 | 19272 | - | cds | coding_transcript | ||
| 22717840 | 22718029 | 19074 | 19263 | - | exon | coding_transcript | ||
| 22717840 | 22718029 | 19074 | 19263 | - | cds | coding_transcript | ||
| 22717840 | 22718029 | 19074 | 19263 | - | exon | coding_transcript | ||
| 22717840 | 22718029 | 19074 | 19263 | - | cds | coding_transcript | ||
| 22717786 | 22717839 | 19264 | 19317 | - | intron | coding_transcript | ||
| 22717786 | 22717839 | 19264 | 19317 | - | intron | coding_transcript | ||
| 22717786 | 22717830 | 19273 | 19317 | - | intron | coding_transcript | ||
| 22717334 | 22717785 | 19318 | 19769 | - | exon | coding_transcript | ||
| 22717334 | 22717785 | 19318 | 19769 | - | exon | coding_transcript | ||
| 22717584 | 22717785 | 19318 | 19519 | - | exon | coding_transcript | ||
| 22717666 | 22717785 | 19318 | 19437 | - | cds | coding_transcript | ||
| 22717666 | 22717785 | 19318 | 19437 | - | cds | coding_transcript | ||
| 22717666 | 22717785 | 19318 | 19437 | - | cds | coding_transcript | ||
| 22717334 | 22717665 | 19438 | 19769 | - | five_prime_utr | coding_transcript | ||
| 22717334 | 22717665 | 19438 | 19769 | - | five_prime_utr | coding_transcript | ||
| 22717584 | 22717665 | 19438 | 19519 | - | five_prime_utr | coding_transcript | ||
| 22717513 | 22717583 | 19520 | 19590 | - | intron | coding_transcript | ||
| 22717334 | 22717512 | 19591 | 19769 | - | exon | coding_transcript | ||
| 22717334 | 22717512 | 19591 | 19769 | - | five_prime_utr | coding_transcript | ||
| 22714330 | 22715191 | 21912 | 22773 | + | gene | CG14451 | coding_transcript | |
| 22710839 | 22712845 | 24258 | 26264 | - | gene | CG32452 | coding_transcript | |
| 22707413 | 22710677 | 26426 | 29690 | + | gene | CG6838 | coding_transcript | |
| 22705257 | 22706763 | 30340 | 31846 | - | gene | CG11370 | coding_transcript | |
| 22690339 | 22690772 | 46331 | 46764 | - | gene | CG32453 | coding_transcript | |
| 22689052 | 22689536 | 47567 | 48051 | - | gene | CG14452 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
mael[16826]::S000169_fly_pretag_fwd
TTTCAGACAACGACTTCTCCGTAAACGGCGCTGATGGGAAACTTAAAAAAgaagtgcataccaatcaggacccgc
|
Fasta
|
|
mael[16826]::S000169_fly_pretag_rev
CTATAAGGAATCATTGTTTCTTAGTCCAATTGATAGACCAAAGTGGCTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|