Clone: 3861840049532044 E02

Tagged gene: betaCop
Identifier: FBgn0008635

Clone FlyFos016336(pRedFlp-Hgr)(betaCop[33767]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
18252916 18255995 10940 14019 + gene CG6106 coding_transcript
18260733 18271657 18757 29681 + gene CrebB-17A coding_transcript
18271554 18273884 29578 31908 - gene por coding_transcript
18274116 18275512 32140 33536 + gene CG6179 coding_transcript
18275580 18279228 33604 38314 - gene betaCop coding_transcript
18275580 18279228 33604 38314 - mrna FBtr0074576 coding_transcript
18275580 18275806 33604 34892 - exon coding_transcript
18275580 18275740 33604 33764 - three_prime_utr coding_transcript
18275741 18275806 33765 34892 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 33841 33874 - misc_recomb FRT CLC
2358 2429 33882 33953 - cds BLRP CLC
2337 2357 33954 33974 - cds TEV CLC
2313 2336 33975 33998 - cds Precision cut site CLC
2271 2312 33999 34040 - cds V5 CLC
1548 2264 34047 34763 - cds SGFP CLC
1482 1541 34770 34829 - cds 2xTY1 CLC
dmel-5.43-X
18275807 18275896 34893 34982 - intron coding_transcript
18275897 18276002 34983 35088 - exon coding_transcript
18275897 18276002 34983 35088 - cds coding_transcript
18276003 18276072 35089 35158 - intron coding_transcript
18276073 18276346 35159 35432 - exon coding_transcript
18276073 18276346 35159 35432 - cds coding_transcript
18276347 18276414 35433 35500 - intron coding_transcript
18276415 18276576 35501 35662 - exon coding_transcript
18276415 18276576 35501 35662 - cds coding_transcript
18276577 18276635 35663 35721 - intron coding_transcript
18276636 18277291 35722 36377 - exon coding_transcript
18276636 18277291 35722 36377 - cds coding_transcript
18277292 18277495 36378 36581 - intron coding_transcript
18277496 18279228 36582 38314 - exon coding_transcript
18277496 18279126 36582 38212 - cds coding_transcript
18279127 18279228 38213 38314 - five_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
betaCop[33767]::S000169_fly_pretag_fwd
GTCTGGGCGACAAGATCAGCTCCTCGCAGAAGCAGTCGGTGCAGGCGGCCgaagtgcataccaatcaggacccgc
 fasta Fasta
betaCop[33767]::S000169_fly_pretag_rev
CGTCGCTCCTGCTGGTGGCTGGTCGTCCACGTCCAGTTCCACGTCCACTActtgtcgtcgtcatccttgtagtca
 fasta Fasta