Clone: 6656113284557374 F05
Tagged gene: Utx
Identifier: FBgn0260749
| Clone | FlyFos015384(pRedFlp-Hgr)(Utx[20720]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 10262426 | 10263582 | 10432 | 11588 | - | gene | Rsf1 | coding_transcript | |
| 10264131 | 10265229 | 12137 | 13235 | + | gene | CG18619 | coding_transcript | |
| 10265339 | 10266570 | 13345 | 14576 | + | gene | Mob3 | coding_transcript | |
| 10266705 | 10268748 | 14711 | 16754 | + | gene | CG4953 | coding_transcript | |
| 10268875 | 10269904 | 16881 | 17910 | + | gene | CG4957 | coding_transcript | |
| 10270067 | 10271465 | 18073 | 19471 | + | gene | Mulk | coding_transcript | |
| 10271443 | 10272223 | 19449 | 20229 | - | gene | trk | coding_transcript | |
| 10272627 | 10278811 | 20633 | 27879 | - | gene | Utx | coding_transcript | |
| 10272627 | 10278811 | 20633 | 27879 | - | mrna | FBtr0080075 | coding_transcript | |
| 10272627 | 10278811 | 20633 | 27879 | - | mrna | FBtr0303903 | coding_transcript | |
| 10272627 | 10277548 | 20633 | 26616 | - | mrna | FBtr0080076 | coding_transcript | |
| 10272627 | 10277548 | 20633 | 26616 | - | mrna | FBtr0080077 | coding_transcript | |
| 10272627 | 10272906 | 20633 | 21974 | - | exon | coding_transcript | ||
| 10272627 | 10272906 | 20633 | 21974 | - | exon | coding_transcript | ||
| 10272627 | 10272906 | 20633 | 21974 | - | exon | coding_transcript | ||
| 10272627 | 10272906 | 20633 | 21974 | - | exon | coding_transcript | ||
| 10272627 | 10272711 | 20633 | 20717 | - | three_prime_utr | coding_transcript | ||
| 10272627 | 10272711 | 20633 | 20717 | - | three_prime_utr | coding_transcript | ||
| 10272627 | 10272711 | 20633 | 20717 | - | three_prime_utr | coding_transcript | ||
| 10272627 | 10272711 | 20633 | 20717 | - | three_prime_utr | coding_transcript | ||
| 10272712 | 10272906 | 20718 | 21974 | - | cds | coding_transcript | ||
| 10272712 | 10272906 | 20718 | 21974 | - | cds | coding_transcript | ||
| 10272712 | 10272906 | 20718 | 21974 | - | cds | coding_transcript | ||
| 10272712 | 10272906 | 20718 | 21974 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 20794 | 20827 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 20835 | 20906 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 20907 | 20927 | - | cds | TEV | CLC | |
| 2313 | 2336 | 20928 | 20951 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 20952 | 20993 | - | cds | V5 | CLC | |
| 1548 | 2264 | 21000 | 21716 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 21723 | 21782 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2L | ||||||||
| 10272907 | 10272995 | 21975 | 22063 | - | intron | coding_transcript | ||
| 10272907 | 10272995 | 21975 | 22063 | - | intron | coding_transcript | ||
| 10272907 | 10272995 | 21975 | 22063 | - | intron | coding_transcript | ||
| 10272907 | 10272995 | 21975 | 22063 | - | intron | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | exon | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | cds | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | exon | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | cds | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | exon | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | cds | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | exon | coding_transcript | ||
| 10272996 | 10273122 | 22064 | 22190 | - | cds | coding_transcript | ||
| 10273123 | 10273196 | 22191 | 22264 | - | intron | coding_transcript | ||
| 10273123 | 10273196 | 22191 | 22264 | - | intron | coding_transcript | ||
| 10273123 | 10273196 | 22191 | 22264 | - | intron | coding_transcript | ||
| 10273123 | 10273196 | 22191 | 22264 | - | intron | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | exon | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | cds | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | exon | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | cds | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | exon | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | cds | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | exon | coding_transcript | ||
| 10273197 | 10273406 | 22265 | 22474 | - | cds | coding_transcript | ||
| 10273407 | 10273462 | 22475 | 22530 | - | intron | coding_transcript | ||
| 10273407 | 10273462 | 22475 | 22530 | - | intron | coding_transcript | ||
| 10273407 | 10273462 | 22475 | 22530 | - | intron | coding_transcript | ||
| 10273407 | 10273462 | 22475 | 22530 | - | intron | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | exon | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | cds | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | exon | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | cds | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | exon | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | cds | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | exon | coding_transcript | ||
| 10273463 | 10273882 | 22531 | 22950 | - | cds | coding_transcript | ||
| 10273883 | 10273965 | 22951 | 23033 | - | intron | coding_transcript | ||
| 10273883 | 10273965 | 22951 | 23033 | - | intron | coding_transcript | ||
| 10273883 | 10273965 | 22951 | 23033 | - | intron | coding_transcript | ||
| 10273883 | 10273965 | 22951 | 23033 | - | intron | coding_transcript | ||
| 10273966 | 10274105 | 23034 | 23173 | - | exon | coding_transcript | ||
| 10273966 | 10274105 | 23034 | 23173 | - | cds | coding_transcript | ||
| 10273966 | 10274105 | 23034 | 23173 | - | exon | coding_transcript | ||
| 10273966 | 10274105 | 23034 | 23173 | - | cds | coding_transcript | ||
| 10273966 | 10274105 | 23034 | 23173 | - | exon | coding_transcript | ||
| 10273966 | 10274105 | 23034 | 23173 | - | cds | coding_transcript | ||
| 10273966 | 10274090 | 23034 | 23158 | - | exon | coding_transcript | ||
| 10273966 | 10274090 | 23034 | 23158 | - | cds | coding_transcript | ||
| 10274091 | 10274164 | 23159 | 23232 | - | intron | coding_transcript | ||
| 10274106 | 10274164 | 23174 | 23232 | - | intron | coding_transcript | ||
| 10274106 | 10274164 | 23174 | 23232 | - | intron | coding_transcript | ||
| 10274106 | 10274164 | 23174 | 23232 | - | intron | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | exon | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | cds | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | exon | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | cds | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | exon | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | cds | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | exon | coding_transcript | ||
| 10274165 | 10274868 | 23233 | 23936 | - | cds | coding_transcript | ||
| 10274869 | 10274933 | 23937 | 24001 | - | intron | coding_transcript | ||
| 10274869 | 10274933 | 23937 | 24001 | - | intron | coding_transcript | ||
| 10274869 | 10274933 | 23937 | 24001 | - | intron | coding_transcript | ||
| 10274869 | 10274933 | 23937 | 24001 | - | intron | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | exon | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | cds | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | exon | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | cds | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | exon | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | cds | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | exon | coding_transcript | ||
| 10274934 | 10275066 | 24002 | 24134 | - | cds | coding_transcript | ||
| 10275067 | 10275126 | 24135 | 24194 | - | intron | coding_transcript | ||
| 10275067 | 10275126 | 24135 | 24194 | - | intron | coding_transcript | ||
| 10275067 | 10275126 | 24135 | 24194 | - | intron | coding_transcript | ||
| 10275067 | 10275126 | 24135 | 24194 | - | intron | coding_transcript | ||
| 10275127 | 10275387 | 24195 | 24455 | - | exon | coding_transcript | ||
| 10275127 | 10275387 | 24195 | 24455 | - | cds | coding_transcript | ||
| 10275127 | 10275387 | 24195 | 24455 | - | exon | coding_transcript | ||
| 10275127 | 10275387 | 24195 | 24455 | - | cds | coding_transcript | ||
| 10275127 | 10275387 | 24195 | 24455 | - | exon | coding_transcript | ||
| 10275127 | 10275387 | 24195 | 24455 | - | cds | coding_transcript | ||
| 10275127 | 10275384 | 24195 | 24452 | - | exon | coding_transcript | ||
| 10275127 | 10275384 | 24195 | 24452 | - | cds | coding_transcript | ||
| 10275385 | 10275448 | 24453 | 24516 | - | intron | coding_transcript | ||
| 10275388 | 10275448 | 24456 | 24516 | - | intron | coding_transcript | ||
| 10275388 | 10275448 | 24456 | 24516 | - | intron | coding_transcript | ||
| 10275388 | 10275448 | 24456 | 24516 | - | intron | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | exon | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | cds | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | exon | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | cds | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | exon | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | cds | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | exon | coding_transcript | ||
| 10275449 | 10275629 | 24517 | 24697 | - | cds | coding_transcript | ||
| 10275630 | 10275696 | 24698 | 24764 | - | intron | coding_transcript | ||
| 10275630 | 10275696 | 24698 | 24764 | - | intron | coding_transcript | ||
| 10275630 | 10275696 | 24698 | 24764 | - | intron | coding_transcript | ||
| 10275630 | 10275696 | 24698 | 24764 | - | intron | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | exon | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | cds | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | exon | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | cds | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | exon | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | cds | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | exon | coding_transcript | ||
| 10275697 | 10275922 | 24765 | 24990 | - | cds | coding_transcript | ||
| 10275923 | 10275983 | 24991 | 25051 | - | intron | coding_transcript | ||
| 10275923 | 10275983 | 24991 | 25051 | - | intron | coding_transcript | ||
| 10275923 | 10275983 | 24991 | 25051 | - | intron | coding_transcript | ||
| 10275923 | 10275983 | 24991 | 25051 | - | intron | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | exon | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | cds | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | exon | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | cds | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | exon | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | cds | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | exon | coding_transcript | ||
| 10275984 | 10276112 | 25052 | 25180 | - | cds | coding_transcript | ||
| 10276113 | 10276391 | 25181 | 25459 | - | intron | coding_transcript | ||
| 10276113 | 10276391 | 25181 | 25459 | - | intron | coding_transcript | ||
| 10276113 | 10276391 | 25181 | 25459 | - | intron | coding_transcript | ||
| 10276113 | 10276391 | 25181 | 25459 | - | intron | coding_transcript | ||
| 10276392 | 10276567 | 25460 | 25635 | - | exon | coding_transcript | ||
| 10276392 | 10276567 | 25460 | 25635 | - | cds | coding_transcript | ||
| 10276392 | 10276567 | 25460 | 25635 | - | exon | coding_transcript | ||
| 10276392 | 10276567 | 25460 | 25635 | - | cds | coding_transcript | ||
| 10276392 | 10276567 | 25460 | 25635 | - | exon | coding_transcript | ||
| 10276392 | 10276567 | 25460 | 25635 | - | exon | coding_transcript | ||
| 10276392 | 10276485 | 25460 | 25553 | - | cds | coding_transcript | ||
| 10276392 | 10276485 | 25460 | 25553 | - | cds | coding_transcript | ||
| 10276486 | 10276567 | 25554 | 25635 | - | five_prime_utr | coding_transcript | ||
| 10276486 | 10276567 | 25554 | 25635 | - | five_prime_utr | coding_transcript | ||
| 10276568 | 10277813 | 25636 | 26881 | - | intron | coding_transcript | ||
| 10276568 | 10277813 | 25636 | 26881 | - | intron | coding_transcript | ||
| 10276568 | 10277406 | 25636 | 26474 | - | intron | coding_transcript | ||
| 10276568 | 10277394 | 25636 | 26462 | - | intron | coding_transcript | ||
| 10277395 | 10277548 | 26463 | 26616 | - | exon | coding_transcript | ||
| 10277395 | 10277548 | 26463 | 26616 | - | five_prime_utr | coding_transcript | ||
| 10277407 | 10277548 | 26475 | 26616 | - | exon | coding_transcript | ||
| 10277407 | 10277548 | 26475 | 26616 | - | five_prime_utr | coding_transcript | ||
| 10277814 | 10277925 | 26882 | 26993 | - | exon | coding_transcript | ||
| 10277814 | 10277925 | 26882 | 26993 | - | cds | coding_transcript | ||
| 10277814 | 10277925 | 26882 | 26993 | - | exon | coding_transcript | ||
| 10277814 | 10277925 | 26882 | 26993 | - | cds | coding_transcript | ||
| 10277926 | 10278249 | 26994 | 27317 | - | intron | coding_transcript | ||
| 10277926 | 10278249 | 26994 | 27317 | - | intron | coding_transcript | ||
| 10278250 | 10278596 | 27318 | 27664 | - | exon | coding_transcript | ||
| 10278250 | 10278596 | 27318 | 27664 | - | cds | coding_transcript | ||
| 10278250 | 10278596 | 27318 | 27664 | - | exon | coding_transcript | ||
| 10278250 | 10278596 | 27318 | 27664 | - | cds | coding_transcript | ||
| 10278597 | 10278648 | 27665 | 27716 | - | intron | coding_transcript | ||
| 10278597 | 10278648 | 27665 | 27716 | - | intron | coding_transcript | ||
| 10278649 | 10278811 | 27717 | 27879 | - | exon | coding_transcript | ||
| 10278649 | 10278811 | 27717 | 27879 | - | exon | coding_transcript | ||
| 10278649 | 10278698 | 27717 | 27766 | - | cds | coding_transcript | ||
| 10278649 | 10278698 | 27717 | 27766 | - | cds | coding_transcript | ||
| 10278699 | 10278811 | 27767 | 27879 | - | five_prime_utr | coding_transcript | ||
| 10278699 | 10278811 | 27767 | 27879 | - | five_prime_utr | coding_transcript | ||
| 10278951 | 10280846 | 28019 | 29914 | - | gene | CG34043 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Utx[20720]::S000169_fly_pretag_fwd
TGTACGATTCGTTTACTTTACACAGAACCCAAGGACTAGCATACACTCAGgaagtgcataccaatcaggacccgc
|
Fasta
|
|
Utx[20720]::S000169_fly_pretag_rev
TACATATATTAAATCTGCATTACTTAAAATGATTCCTCGTATTACAACTActtgtcgtcgtcatccttgtagtca
|
Fasta
|