Clone: 6656113284557374 C02

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-2L
4958411	4965432	10841	17862	+	gene	CG34124	coding_transcript
4965694	4966400	18124	18830	+	gene	CG34125	coding_transcript
4966367	4967778	18797	20208	-	gene	Trip1	coding_transcript
4967832	4968936	20262	22428	-	gene	Scox	coding_transcript
4967832	4968936	20262	22428	-	mrna	FBtr0079052	coding_transcript
4967832	4968368	20262	21860	-	exon		coding_transcript
4967832	4968006	20262	20436	-	three_prime_utr		coding_transcript
4968007	4968368	20437	21860	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	20513	20546	-	misc_recomb	FRT	CLC
2358	2429	20554	20625	-	cds	BLRP	CLC
2337	2357	20626	20646	-	cds	TEV	CLC
2313	2336	20647	20670	-	cds	Precision cut site	CLC
2271	2312	20671	20712	-	cds	V5	CLC
1548	2264	20719	21435	-	cds	SGFP	CLC
1482	1541	21442	21501	-	cds	2xTY1	CLC
dmel-5.43-2L
4968369	4968431	21861	21923	-	intron		coding_transcript
4968432	4968936	21924	22428	-	exon		coding_transcript
4968432	4968825	21924	22317	-	cds		coding_transcript
4968826	4968936	22318	22428	-	five_prime_utr		coding_transcript
4969004	4970216	22496	23708	+	gene	CG3756	coding_transcript
4970135	4971453	23627	24945	-	gene	l(2)05714	coding_transcript
4971704	4973687	25196	27179	+	gene	CG14043	coding_transcript
4973978	4975284	27470	28776	+	gene	mRpL28	coding_transcript
4975300	4977018	28792	30510	-	gene	Gmd	coding_transcript
4977266	4978567	30758	32059	+	gene	CG3792	coding_transcript
4978484	4979339	31976	32831	-	gene	CG8891	coding_transcript
4979513	4981588	33005	35080	-	gene	CG8892	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
Scox[20439]::S000169_fly_pretag_rev TACATTAAGTAAATACAACGAAACAACATTTGCCTAGCTTAGCCAGCCTActtgtcgtcgtcatccttgtagtca	Fasta
Scox[20439]::S000169_fly_pretag_fwd TGGTGAACATAGCCAAGTGGAATTCAATGAACAAAAAGGGATGGTTCAGCgaagtgcataccaatcaggacccgc	Fasta