Clone: 6656113284557374 D01

Tagged gene: snf
Identifier: FBgn0003449

Clone FlyFos015052(pRedFlp-Hgr)(snf[18374]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
5211462 5213104 9730 11372 - gene Sas10 coding_transcript
5209163 5211328 11506 13671 + gene CG15930 coding_transcript
5207299 5209268 13566 15535 - gene CG4198 coding_transcript
5206406 5207155 15679 16428 - gene dhd coding_transcript
5204614 5205921 16913 18220 + gene TrxT coding_transcript
5203280 5204534 18300 20616 - gene snf coding_transcript
5203280 5204534 18300 20616 - mrna FBtr0070748 coding_transcript
5204165 5204534 18300 19731 - exon coding_transcript
5204463 5204534 18300 18371 - three_prime_utr coding_transcript
5204165 5204462 18372 19731 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 18448 18481 - misc_recomb FRT CLC
2358 2429 18489 18560 - cds BLRP CLC
2337 2357 18561 18581 - cds TEV CLC
2313 2336 18582 18605 - cds Precision cut site CLC
2271 2312 18606 18647 - cds V5 CLC
1548 2264 18654 19370 - cds SGFP CLC
1482 1541 19377 19436 - cds 2xTY1 CLC
dmel-5.43-X
5203740 5204164 19732 20156 - intron coding_transcript
5203280 5203739 20157 20616 - exon coding_transcript
5203387 5203739 20157 20509 - cds coding_transcript
5203280 5203386 20510 20616 - five_prime_utr coding_transcript
5201498 5202970 20926 22398 + gene Cdk7 coding_transcript
5200294 5201450 22446 23602 + gene CG17764 coding_transcript
5190114 5200321 23575 33782 - gene CG42749 coding_transcript
5197021 5199751 24145 26875 + gene CG3323 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
snf[18374]::S000169_fly_pretag_rev
TAAATTATTATTGGAGTTGCTGGAACGCCCGGCGACTGGAGTTGCGTTCActtgtcgtcgtcatccttgtagtca
 fasta Fasta
snf[18374]::S000169_fly_pretag_fwd
GCTTCAAGATTACGCCGACGCACGCCATGAAGATAACGTTCGCCAAGAAGgaagtgcataccaatcaggacccgc
 fasta Fasta