Clone: 1727874022880168 A05
Tagged gene: Slip1
Identifier: FBgn0024728
| Clone | FlyFos015346(pRedFlp-Hgr)(Slip1[35404]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-4 | ||||||||
| 691768 | 707508 | 17970 | 33710 | - | gene | CG11360 | coding_transcript | |
| 684214 | 690510 | 34968 | 42326 | - | gene | Slip1 | coding_transcript | |
| 684214 | 690510 | 34968 | 42326 | - | mrna | FBtr0089090 | coding_transcript | |
| 684214 | 690510 | 34968 | 42326 | - | mrna | FBtr0310536 | coding_transcript | |
| 684214 | 690510 | 34968 | 42326 | - | mrna | FBtr0310537 | coding_transcript | |
| 689756 | 690510 | 34968 | 36784 | - | exon | coding_transcript | ||
| 689756 | 690510 | 34968 | 36784 | - | exon | coding_transcript | ||
| 689756 | 690510 | 34968 | 36784 | - | exon | coding_transcript | ||
| 689812 | 690510 | 34968 | 36728 | - | three_prime_utr | coding_transcript | ||
| 690077 | 690510 | 34968 | 35401 | - | three_prime_utr | coding_transcript | ||
| 690077 | 690510 | 34968 | 35401 | - | three_prime_utr | coding_transcript | ||
| 689756 | 690076 | 35402 | 36784 | - | cds | coding_transcript | ||
| 689756 | 690076 | 35402 | 36784 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 35478 | 35511 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 35519 | 35590 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 35591 | 35611 | - | cds | TEV | CLC | |
| 2313 | 2336 | 35612 | 35635 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 35636 | 35677 | - | cds | V5 | CLC | |
| 1548 | 2264 | 35684 | 36400 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 36407 | 36466 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-4 | ||||||||
| 689756 | 689811 | 36729 | 36784 | - | cds | coding_transcript | ||
| 687559 | 689755 | 36785 | 38981 | - | intron | coding_transcript | ||
| 689201 | 689755 | 36785 | 37339 | - | intron | coding_transcript | ||
| 689201 | 689755 | 36785 | 37339 | - | intron | coding_transcript | ||
| 689046 | 689200 | 37340 | 37494 | - | exon | coding_transcript | ||
| 689046 | 689200 | 37340 | 37494 | - | cds | coding_transcript | ||
| 689046 | 689200 | 37340 | 37494 | - | exon | coding_transcript | ||
| 689046 | 689200 | 37340 | 37494 | - | cds | coding_transcript | ||
| 687559 | 689045 | 37495 | 38981 | - | intron | coding_transcript | ||
| 687559 | 689045 | 37495 | 38981 | - | intron | coding_transcript | ||
| 686577 | 687558 | 38982 | 39963 | - | exon | coding_transcript | ||
| 686577 | 687558 | 38982 | 39963 | - | cds | coding_transcript | ||
| 686577 | 687558 | 38982 | 39963 | - | exon | coding_transcript | ||
| 686577 | 687558 | 38982 | 39963 | - | cds | coding_transcript | ||
| 686577 | 687558 | 38982 | 39963 | - | exon | coding_transcript | ||
| 686577 | 687558 | 38982 | 39963 | - | cds | coding_transcript | ||
| 684967 | 686576 | 39964 | 41573 | - | intron | coding_transcript | ||
| 685932 | 686576 | 39964 | 40608 | - | intron | coding_transcript | ||
| 685932 | 686576 | 39964 | 40608 | - | intron | coding_transcript | ||
| 685614 | 685931 | 40609 | 40926 | - | exon | coding_transcript | ||
| 685614 | 685931 | 40609 | 40926 | - | cds | coding_transcript | ||
| 685614 | 685931 | 40609 | 40926 | - | exon | coding_transcript | ||
| 685614 | 685931 | 40609 | 40926 | - | cds | coding_transcript | ||
| 684967 | 685613 | 40927 | 41573 | - | intron | coding_transcript | ||
| 684967 | 685613 | 40927 | 41573 | - | intron | coding_transcript | ||
| 684481 | 684966 | 41574 | 42059 | - | exon | coding_transcript | ||
| 684481 | 684966 | 41574 | 42059 | - | cds | coding_transcript | ||
| 684481 | 684966 | 41574 | 42059 | - | exon | coding_transcript | ||
| 684481 | 684966 | 41574 | 42059 | - | cds | coding_transcript | ||
| 684481 | 684966 | 41574 | 42059 | - | exon | coding_transcript | ||
| 684481 | 684966 | 41574 | 42059 | - | cds | coding_transcript | ||
| 684369 | 684480 | 42060 | 42171 | - | intron | coding_transcript | ||
| 684369 | 684480 | 42060 | 42171 | - | intron | coding_transcript | ||
| 684369 | 684480 | 42060 | 42171 | - | intron | coding_transcript | ||
| 684214 | 684368 | 42172 | 42326 | - | exon | coding_transcript | ||
| 684214 | 684368 | 42172 | 42326 | - | exon | coding_transcript | ||
| 684214 | 684368 | 42172 | 42326 | - | exon | coding_transcript | ||
| 684327 | 684368 | 42172 | 42213 | - | cds | coding_transcript | ||
| 684327 | 684368 | 42172 | 42213 | - | cds | coding_transcript | ||
| 684327 | 684368 | 42172 | 42213 | - | cds | coding_transcript | ||
| 684214 | 684326 | 42214 | 42326 | - | five_prime_utr | coding_transcript | ||
| 684214 | 684326 | 42214 | 42326 | - | five_prime_utr | coding_transcript | ||
| 684214 | 684326 | 42214 | 42326 | - | five_prime_utr | coding_transcript | ||
| 670064 | 682391 | 44149 | 56476 | + | gene | gw | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Slip1[35404]::S000169_fly_pretag_fwd
TCGAACGAGCTCGAGAGAAGAGACATCATCAGACGCAGCAACAGCAACAAgaagtgcataccaatcaggacccgc
|
Fasta
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|
Slip1[35404]::S000169_fly_pretag_rev
AAAGCTATGTAAGTTTTAAATGGTACAAAAGGAAAATGTTACTGTGGCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|