Clone: 3439887580579347 G07

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-X
15626215	15627696	18040	20583	+	gene	CG8191	coding_transcript
15627248	15627972	19073	20859	-	gene	CG12379	coding_transcript
15627248	15627972	19073	20859	-	mrna	FBtr0273278	coding_transcript
15627248	15627586	19073	20473	-	exon		coding_transcript
15627248	15627274	19073	19099	-	three_prime_utr		coding_transcript
15627262	15627696	19087	20583	+	three_prime_utr		coding_transcript
15627275	15627586	19100	20473	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	19176	19209	-	misc_recomb	FRT	CLC
2358	2429	19217	19288	-	cds	BLRP	CLC
2337	2357	19289	19309	-	cds	TEV	CLC
2313	2336	19310	19333	-	cds	Precision cut site	CLC
2271	2312	19334	19375	-	cds	V5	CLC
1548	2264	19382	20098	-	cds	SGFP	CLC
1482	1541	20105	20164	-	cds	2xTY1	CLC
dmel-5.43-X
15627587	15627743	20474	20630	-	intron		coding_transcript
15627744	15627972	20631	20859	-	exon		coding_transcript
15627744	15627956	20631	20843	-	cds		coding_transcript
15627957	15627972	20844	20859	-	five_prime_utr		coding_transcript
15628313	15629814	21200	22701	+	gene	l(1)G0136	coding_transcript
15629806	15631109	22693	23996	-	gene	Actr13E	coding_transcript
15631526	15632942	24413	25829	-	gene	CG11679	coding_transcript
15633275	15634275	26162	27162	+	gene	CG8206	coding_transcript
15635376	15640240	28263	33127	-	gene	CG8944	coding_transcript
15640659	15643006	33546	35893	+	gene	Tcp-1zeta	coding_transcript
15643210	15645255	36097	38142	+	gene	CG8239	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG12379[19102]::S000169_fly_pretag_fwd AGGTGGTTCGCCTGACCGATGGCAACTGCGAGTTTTTGCCGAAACATGATgaagtgcataccaatcaggacccgc	Fasta
CG12379[19102]::S000169_fly_pretag_rev GCTGCTAAATAAAGTGGCATTCGTTTTCACTTAACTACACTACGAGTTTActtgtcgtcgtcatccttgtagtca	Fasta