Clone: 5906201510157786 F04

Explore vector in genome browser.

Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	bad

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-2L
12446224	12448113	12043	13932	+	gene	CG5421	coding_transcript
12441475	12445922	14234	18681	+	gene	Oatp33Ea	coding_transcript
12434432	12440605	19551	26786	-	gene	Elf	coding_transcript
12434432	12440605	19551	26786	-	mrna	FBtr0080369	coding_transcript
12439521	12440605	19551	21697	-	exon		coding_transcript
12439565	12440605	19551	20591	-	three_prime_utr		coding_transcript
12439521	12439564	20592	21697	-	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437	2470	20668	20701	-	misc_recomb	FRT	CLC
2358	2429	20709	20780	-	cds	BLRP	CLC
2337	2357	20781	20801	-	cds	TEV	CLC
2313	2336	20802	20825	-	cds	Precision cut site	CLC
2271	2312	20826	20867	-	cds	V5	CLC
1548	2264	20874	21590	-	cds	SGFP	CLC
1482	1541	21597	21656	-	cds	2xTY1	CLC
dmel-5.43-2L
12439465	12439520	21698	21753	-	intron		coding_transcript
12439296	12439464	21754	21922	-	exon		coding_transcript
12439296	12439464	21754	21922	-	cds		coding_transcript
12439231	12439295	21923	21987	-	intron		coding_transcript
12439054	12439230	21988	22164	-	exon		coding_transcript
12439054	12439230	21988	22164	-	cds		coding_transcript
12438989	12439053	22165	22229	-	intron		coding_transcript
12438902	12438988	22230	22316	-	exon		coding_transcript
12438902	12438988	22230	22316	-	cds		coding_transcript
12438842	12438901	22317	22376	-	intron		coding_transcript
12438072	12438841	22377	23146	-	exon		coding_transcript
12438072	12438841	22377	23146	-	cds		coding_transcript
12437999	12438071	23147	23219	-	intron		coding_transcript
12437813	12437998	23220	23405	-	exon		coding_transcript
12437813	12437998	23220	23405	-	cds		coding_transcript
12435424	12437812	23406	25794	-	intron		coding_transcript
12434432	12435423	25795	26786	-	exon		coding_transcript
12434997	12435423	25795	26221	-	cds		coding_transcript
12434432	12434996	26222	26786	-	five_prime_utr		coding_transcript
12431075	12434665	26553	30143	+	gene	SC35	coding_transcript
12434559	12434665	26553	26659	+	exon		coding_transcript
12434559	12434665	26553	26659	+	five_prime_utr		coding_transcript
12429827	12430892	30326	31391	+	gene	CG5435	coding_transcript
12428032	12430021	31197	33186	-	gene	CG6388	coding_transcript
12426899	12427663	33555	34319	+	gene	CG5446	coding_transcript
12424904	12426440	34778	36314	-	gene	CG6405	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
Elf[20594]::S000169_fly_pretag_rev CAAAAATCGCAATGAAAGGCGGGCGCTCGAATTTAGCTAGGCTCAATTTActtgtcgtcgtcatccttgtagtca	Fasta
Elf[20594]::S000169_fly_pretag_fwd ATCTTTCAGACAAAACCATTGCCATTGGCAAGGTGCTGAAGGTGGTCGAAgaagtgcataccaatcaggacccgc	Fasta