Clone: 6581804864395902 B01

Tagged gene: Shal
Identifier: FBgn0005564

Clone FlyFos030315(pRedFlp-Hgr)(Shal[36512]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
19582172 19583615 14621 16064 + gene CG14100 coding_transcript
19579355 19582211 16025 18881 - gene CG9330 coding_transcript
19578193 19579328 18908 20043 + gene CG9231 coding_transcript
19561538 19577680 20556 37760 + gene Shal coding_transcript
19561538 19577680 20556 37760 + mrna FBtr0112853 coding_transcript
19564680 19577680 20556 33556 + mrna FBtr0074973 coding_transcript
19577411 19577680 20556 20825 + exon coding_transcript
19577411 19577680 20556 20825 + five_prime_utr coding_transcript
19577411 19577680 20556 20825 + exon coding_transcript
19577411 19577680 20556 20825 + five_prime_utr coding_transcript
19568160 19577410 20826 30076 + intron coding_transcript
19568160 19577410 20826 30076 + intron coding_transcript
19567594 19568159 30077 30642 + exon coding_transcript
19567594 19568159 30077 30642 + exon coding_transcript
19567796 19568159 30077 30440 + five_prime_utr coding_transcript
19567796 19568159 30077 30440 + five_prime_utr coding_transcript
19567594 19567795 30441 30642 + cds coding_transcript
19567594 19567795 30441 30642 + cds coding_transcript
19567012 19567593 30643 31224 + intron coding_transcript
19567012 19567593 30643 31224 + intron coding_transcript
19566099 19567011 31225 32137 + exon coding_transcript
19566099 19567011 31225 32137 + cds coding_transcript
19566099 19567011 31225 32137 + exon coding_transcript
19566099 19567011 31225 32137 + cds coding_transcript
19565977 19566098 32138 32259 + intron coding_transcript
19565977 19566098 32138 32259 + intron coding_transcript
19565814 19565976 32260 32422 + exon coding_transcript
19565814 19565976 32260 32422 + cds coding_transcript
19565814 19565976 32260 32422 + exon coding_transcript
19565814 19565976 32260 32422 + cds coding_transcript
19565580 19565813 32423 32656 + intron coding_transcript
19565580 19565813 32423 32656 + intron coding_transcript
19565391 19565579 32657 32845 + exon coding_transcript
19565391 19565579 32657 32845 + cds coding_transcript
19565391 19565579 32657 32845 + exon coding_transcript
19565391 19565579 32657 32845 + cds coding_transcript
19562914 19565390 32846 35322 + intron coding_transcript
19565180 19565390 32846 33056 + intron coding_transcript
19564680 19565179 33057 33556 + exon coding_transcript
19565174 19565179 33057 33062 + cds coding_transcript
19564680 19565173 33063 33556 + three_prime_utr coding_transcript
19562761 19562913 35323 35475 + exon coding_transcript
19562761 19562913 35323 35475 + cds coding_transcript
19561817 19562760 35476 36419 + intron coding_transcript
19561538 19561816 36420 37760 + exon coding_transcript
19561721 19561816 36420 37577 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 36513 36572 + cds 2xTY1 CLC
1548 2264 36579 37295 + cds SGFP CLC
2271 2312 37302 37343 + cds V5 CLC
2313 2336 37344 37367 + cds Precision cut site CLC
2337 2357 37368 37388 + cds TEV CLC
2358 2429 37389 37460 + cds BLRP CLC
3813 3846 37468 37501 + misc_recomb FRT CLC
dmel-5.43-3L
19561538 19561720 37578 37760 + three_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Shal[36512]::S000169_fly_pretag_fwd
GCCAAAACAATCAGCCCATGGATGGCACCTACCTGGTGGAGGCCTCGTTCgaagtgcataccaatcaggacccgc
 fasta Fasta
Shal[36512]::S000169_fly_pretag_rev
TCCCTGGCCGAGGATGTGCATCTCGACGCCAACCTGCTGCCGCCGGCTCActtgtcgtcgtcatccttgtagtca
 fasta Fasta