Clone: 77426861790443 G12
Tagged gene: NAT1
Identifier: FBgn0010488
| Clone | FlyFos030142(pRedFlp-Hgr)(NAT1[22119]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2R | ||||||||
| 8818417 | 8821550 | 11129 | 14262 | + | gene | CG17019 | coding_transcript | |
| 8816368 | 8818151 | 14528 | 16311 | - | gene | sug | coding_transcript | |
| 8811409 | 8812169 | 20510 | 21270 | - | gene | CG13319 | coding_transcript | |
| 8803502 | 8810745 | 21934 | 30239 | - | gene | NAT1 | coding_transcript | |
| 8803502 | 8810745 | 21934 | 30239 | - | mrna | FBtr0087786 | coding_transcript | |
| 8803502 | 8810745 | 21934 | 30239 | - | mrna | FBtr0100672 | coding_transcript | |
| 8805363 | 8810745 | 21934 | 28378 | - | mrna | FBtr0087787 | coding_transcript | |
| 8810384 | 8810745 | 21934 | 23357 | - | exon | coding_transcript | ||
| 8810384 | 8810745 | 21934 | 23357 | - | exon | coding_transcript | ||
| 8810384 | 8810745 | 21934 | 23357 | - | exon | coding_transcript | ||
| 8810563 | 8810745 | 21934 | 22116 | - | three_prime_utr | coding_transcript | ||
| 8810563 | 8810745 | 21934 | 22116 | - | three_prime_utr | coding_transcript | ||
| 8810563 | 8810745 | 21934 | 22116 | - | three_prime_utr | coding_transcript | ||
| 8810384 | 8810562 | 22117 | 23357 | - | cds | coding_transcript | ||
| 8810384 | 8810562 | 22117 | 23357 | - | cds | coding_transcript | ||
| 8810384 | 8810562 | 22117 | 23357 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 22193 | 22226 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 22234 | 22305 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 22306 | 22326 | - | cds | TEV | CLC | |
| 2313 | 2336 | 22327 | 22350 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 22351 | 22392 | - | cds | V5 | CLC | |
| 1548 | 2264 | 22399 | 23115 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 23122 | 23181 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2R | ||||||||
| 8810316 | 8810383 | 23358 | 23425 | - | intron | coding_transcript | ||
| 8810316 | 8810383 | 23358 | 23425 | - | intron | coding_transcript | ||
| 8810316 | 8810383 | 23358 | 23425 | - | intron | coding_transcript | ||
| 8808490 | 8810315 | 23426 | 25251 | - | exon | coding_transcript | ||
| 8808490 | 8810315 | 23426 | 25251 | - | cds | coding_transcript | ||
| 8808490 | 8810315 | 23426 | 25251 | - | exon | coding_transcript | ||
| 8808490 | 8810315 | 23426 | 25251 | - | cds | coding_transcript | ||
| 8808490 | 8810315 | 23426 | 25251 | - | exon | coding_transcript | ||
| 8808490 | 8810315 | 23426 | 25251 | - | cds | coding_transcript | ||
| 8808365 | 8808489 | 25252 | 25376 | - | intron | coding_transcript | ||
| 8808365 | 8808489 | 25252 | 25376 | - | intron | coding_transcript | ||
| 8808365 | 8808489 | 25252 | 25376 | - | intron | coding_transcript | ||
| 8805500 | 8808364 | 25377 | 28241 | - | exon | coding_transcript | ||
| 8805500 | 8808364 | 25377 | 28241 | - | exon | coding_transcript | ||
| 8805500 | 8808364 | 25377 | 28241 | - | exon | coding_transcript | ||
| 8805789 | 8808364 | 25377 | 27952 | - | cds | coding_transcript | ||
| 8807613 | 8808364 | 25377 | 26128 | - | cds | coding_transcript | ||
| 8807613 | 8808364 | 25377 | 26128 | - | cds | coding_transcript | ||
| 8805500 | 8807612 | 26129 | 28241 | - | five_prime_utr | coding_transcript | ||
| 8805500 | 8807612 | 26129 | 28241 | - | five_prime_utr | coding_transcript | ||
| 8805500 | 8805788 | 27953 | 28241 | - | five_prime_utr | coding_transcript | ||
| 8803570 | 8805499 | 28242 | 30171 | - | intron | coding_transcript | ||
| 8803570 | 8805499 | 28242 | 30171 | - | intron | coding_transcript | ||
| 8805410 | 8805499 | 28242 | 28331 | - | intron | coding_transcript | ||
| 8805363 | 8805409 | 28332 | 28378 | - | exon | coding_transcript | ||
| 8805363 | 8805409 | 28332 | 28378 | - | five_prime_utr | coding_transcript | ||
| 8803502 | 8803569 | 30172 | 30239 | - | exon | coding_transcript | ||
| 8803502 | 8803569 | 30172 | 30239 | - | five_prime_utr | coding_transcript | ||
| 8803502 | 8803569 | 30172 | 30239 | - | exon | coding_transcript | ||
| 8803502 | 8803569 | 30172 | 30239 | - | five_prime_utr | coding_transcript | ||
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
NAT1[22119]::S000169_fly_pretag_rev
AAGTGATAAACATATAGCGCTGTTATTATGCGGGACTGCGTTGCTTTCTActtgtcgtcgtcatccttgtagtca
|
Fasta
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NAT1[22119]::S000169_fly_pretag_fwd
ACGCCTGGTTGACTTGGCTGCAGGAGGCCGAATCTGAGGACGATGAGGATgaagtgcataccaatcaggacccgc
|
Fasta
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