Clone: 77426861790443 G10
Tagged gene: prom
Identifier: FBgn0259210
| Clone | FlyFos030118(pRedFlp-Hgr)(prom[16420]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2R | ||||||||
| 20299414 | 20302820 | 12738 | 16144 | + | gene | CG3419 | coding_transcript | |
| 20302931 | 20315910 | 16255 | 30296 | - | gene | prom | coding_transcript | |
| 20302931 | 20315910 | 16255 | 30296 | - | mrna | FBtr0299698 | coding_transcript | |
| 20302931 | 20315910 | 16255 | 30296 | - | mrna | FBtr0299700 | coding_transcript | |
| 20302931 | 20303196 | 16255 | 17582 | - | exon | coding_transcript | ||
| 20302931 | 20303196 | 16255 | 17582 | - | exon | coding_transcript | ||
| 20302931 | 20303093 | 16255 | 16417 | - | three_prime_utr | coding_transcript | ||
| 20302931 | 20303093 | 16255 | 16417 | - | three_prime_utr | coding_transcript | ||
| 20303094 | 20303196 | 16418 | 17582 | - | cds | coding_transcript | ||
| 20303094 | 20303196 | 16418 | 17582 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 16494 | 16527 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 16535 | 16606 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 16607 | 16627 | - | cds | TEV | CLC | |
| 2313 | 2336 | 16628 | 16651 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 16652 | 16693 | - | cds | V5 | CLC | |
| 1548 | 2264 | 16700 | 17416 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 17423 | 17482 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2R | ||||||||
| 20303197 | 20303417 | 17583 | 17803 | - | intron | coding_transcript | ||
| 20303197 | 20303417 | 17583 | 17803 | - | intron | coding_transcript | ||
| 20303418 | 20303483 | 17804 | 17869 | - | exon | coding_transcript | ||
| 20303418 | 20303483 | 17804 | 17869 | - | cds | coding_transcript | ||
| 20303418 | 20303483 | 17804 | 17869 | - | exon | coding_transcript | ||
| 20303418 | 20303483 | 17804 | 17869 | - | cds | coding_transcript | ||
| 20303484 | 20303704 | 17870 | 18090 | - | intron | coding_transcript | ||
| 20303484 | 20303704 | 17870 | 18090 | - | intron | coding_transcript | ||
| 20303705 | 20303788 | 18091 | 18174 | - | exon | coding_transcript | ||
| 20303705 | 20303788 | 18091 | 18174 | - | cds | coding_transcript | ||
| 20303705 | 20303788 | 18091 | 18174 | - | exon | coding_transcript | ||
| 20303705 | 20303788 | 18091 | 18174 | - | cds | coding_transcript | ||
| 20303789 | 20304644 | 18175 | 19030 | - | intron | coding_transcript | ||
| 20303789 | 20303936 | 18175 | 18322 | - | intron | coding_transcript | ||
| 20303937 | 20304122 | 18323 | 18508 | - | exon | coding_transcript | ||
| 20303937 | 20304122 | 18323 | 18508 | - | cds | coding_transcript | ||
| 20304123 | 20304200 | 18509 | 18586 | - | intron | coding_transcript | ||
| 20304201 | 20304380 | 18587 | 18766 | - | exon | coding_transcript | ||
| 20304201 | 20304380 | 18587 | 18766 | - | cds | coding_transcript | ||
| 20304381 | 20304444 | 18767 | 18830 | - | intron | coding_transcript | ||
| 20304445 | 20304585 | 18831 | 18971 | - | exon | coding_transcript | ||
| 20304445 | 20304585 | 18831 | 18971 | - | cds | coding_transcript | ||
| 20304586 | 20304644 | 18972 | 19030 | - | intron | coding_transcript | ||
| 20304645 | 20304860 | 19031 | 19246 | - | exon | coding_transcript | ||
| 20304645 | 20304860 | 19031 | 19246 | - | cds | coding_transcript | ||
| 20304645 | 20304860 | 19031 | 19246 | - | exon | coding_transcript | ||
| 20304645 | 20304860 | 19031 | 19246 | - | cds | coding_transcript | ||
| 20304861 | 20304953 | 19247 | 19339 | - | intron | coding_transcript | ||
| 20304861 | 20304953 | 19247 | 19339 | - | intron | coding_transcript | ||
| 20304950 | 20315910 | 19336 | 30296 | - | mrna | FBtr0299699 | coding_transcript | |
| 20304950 | 20305382 | 19336 | 19768 | - | exon | coding_transcript | ||
| 20304950 | 20305382 | 19336 | 19768 | - | cds | coding_transcript | ||
| 20304954 | 20305382 | 19340 | 19768 | - | exon | coding_transcript | ||
| 20304954 | 20305382 | 19340 | 19768 | - | cds | coding_transcript | ||
| 20304954 | 20305382 | 19340 | 19768 | - | exon | coding_transcript | ||
| 20304954 | 20305382 | 19340 | 19768 | - | cds | coding_transcript | ||
| 20305383 | 20306143 | 19769 | 20529 | - | intron | coding_transcript | ||
| 20305383 | 20306143 | 19769 | 20529 | - | intron | coding_transcript | ||
| 20305383 | 20306143 | 19769 | 20529 | - | intron | coding_transcript | ||
| 20306144 | 20306397 | 20530 | 20783 | - | exon | coding_transcript | ||
| 20306144 | 20306397 | 20530 | 20783 | - | cds | coding_transcript | ||
| 20306144 | 20306397 | 20530 | 20783 | - | exon | coding_transcript | ||
| 20306144 | 20306397 | 20530 | 20783 | - | cds | coding_transcript | ||
| 20306144 | 20306397 | 20530 | 20783 | - | exon | coding_transcript | ||
| 20306144 | 20306397 | 20530 | 20783 | - | cds | coding_transcript | ||
| 20306398 | 20306507 | 20784 | 20893 | - | intron | coding_transcript | ||
| 20306398 | 20306507 | 20784 | 20893 | - | intron | coding_transcript | ||
| 20306398 | 20306507 | 20784 | 20893 | - | intron | coding_transcript | ||
| 20306508 | 20306799 | 20894 | 21185 | - | exon | coding_transcript | ||
| 20306508 | 20306799 | 20894 | 21185 | - | cds | coding_transcript | ||
| 20306508 | 20306799 | 20894 | 21185 | - | exon | coding_transcript | ||
| 20306508 | 20306799 | 20894 | 21185 | - | cds | coding_transcript | ||
| 20306508 | 20306799 | 20894 | 21185 | - | exon | coding_transcript | ||
| 20306508 | 20306799 | 20894 | 21185 | - | cds | coding_transcript | ||
| 20306800 | 20307826 | 21186 | 22212 | - | intron | coding_transcript | ||
| 20306800 | 20307826 | 21186 | 22212 | - | intron | coding_transcript | ||
| 20306800 | 20307826 | 21186 | 22212 | - | intron | coding_transcript | ||
| 20307827 | 20308352 | 22213 | 22738 | - | exon | coding_transcript | ||
| 20307827 | 20308352 | 22213 | 22738 | - | cds | coding_transcript | ||
| 20307827 | 20308352 | 22213 | 22738 | - | exon | coding_transcript | ||
| 20307827 | 20308352 | 22213 | 22738 | - | cds | coding_transcript | ||
| 20307827 | 20308352 | 22213 | 22738 | - | exon | coding_transcript | ||
| 20307827 | 20308352 | 22213 | 22738 | - | cds | coding_transcript | ||
| 20308353 | 20308863 | 22739 | 23249 | - | intron | coding_transcript | ||
| 20308353 | 20308863 | 22739 | 23249 | - | intron | coding_transcript | ||
| 20308353 | 20308863 | 22739 | 23249 | - | intron | coding_transcript | ||
| 20308864 | 20309020 | 23250 | 23406 | - | exon | coding_transcript | ||
| 20308864 | 20309020 | 23250 | 23406 | - | cds | coding_transcript | ||
| 20308864 | 20309020 | 23250 | 23406 | - | exon | coding_transcript | ||
| 20308864 | 20309020 | 23250 | 23406 | - | cds | coding_transcript | ||
| 20308864 | 20309020 | 23250 | 23406 | - | exon | coding_transcript | ||
| 20308864 | 20309020 | 23250 | 23406 | - | cds | coding_transcript | ||
| 20309021 | 20309390 | 23407 | 23776 | - | intron | coding_transcript | ||
| 20309021 | 20309390 | 23407 | 23776 | - | intron | coding_transcript | ||
| 20309021 | 20309390 | 23407 | 23776 | - | intron | coding_transcript | ||
| 20309391 | 20309602 | 23777 | 23988 | - | exon | coding_transcript | ||
| 20309391 | 20309602 | 23777 | 23988 | - | cds | coding_transcript | ||
| 20309391 | 20309602 | 23777 | 23988 | - | exon | coding_transcript | ||
| 20309391 | 20309602 | 23777 | 23988 | - | cds | coding_transcript | ||
| 20309391 | 20309602 | 23777 | 23988 | - | exon | coding_transcript | ||
| 20309391 | 20309602 | 23777 | 23988 | - | cds | coding_transcript | ||
| 20309603 | 20310431 | 23989 | 24817 | - | intron | coding_transcript | ||
| 20309603 | 20310431 | 23989 | 24817 | - | intron | coding_transcript | ||
| 20309603 | 20310431 | 23989 | 24817 | - | intron | coding_transcript | ||
| 20310432 | 20310527 | 24818 | 24913 | - | exon | coding_transcript | ||
| 20310432 | 20310527 | 24818 | 24913 | - | cds | coding_transcript | ||
| 20310432 | 20310527 | 24818 | 24913 | - | exon | coding_transcript | ||
| 20310432 | 20310527 | 24818 | 24913 | - | cds | coding_transcript | ||
| 20310432 | 20310527 | 24818 | 24913 | - | exon | coding_transcript | ||
| 20310432 | 20310527 | 24818 | 24913 | - | cds | coding_transcript | ||
| 20310528 | 20310706 | 24914 | 25092 | - | intron | coding_transcript | ||
| 20310528 | 20310706 | 24914 | 25092 | - | intron | coding_transcript | ||
| 20310528 | 20310706 | 24914 | 25092 | - | intron | coding_transcript | ||
| 20310707 | 20310894 | 25093 | 25280 | - | exon | coding_transcript | ||
| 20310707 | 20310894 | 25093 | 25280 | - | cds | coding_transcript | ||
| 20310707 | 20310894 | 25093 | 25280 | - | exon | coding_transcript | ||
| 20310707 | 20310894 | 25093 | 25280 | - | cds | coding_transcript | ||
| 20310707 | 20310894 | 25093 | 25280 | - | exon | coding_transcript | ||
| 20310707 | 20310894 | 25093 | 25280 | - | cds | coding_transcript | ||
| 20310895 | 20310964 | 25281 | 25350 | - | intron | coding_transcript | ||
| 20310895 | 20310964 | 25281 | 25350 | - | intron | coding_transcript | ||
| 20310895 | 20310964 | 25281 | 25350 | - | intron | coding_transcript | ||
| 20310965 | 20311197 | 25351 | 25583 | - | exon | coding_transcript | ||
| 20310965 | 20311197 | 25351 | 25583 | - | cds | coding_transcript | ||
| 20310965 | 20311197 | 25351 | 25583 | - | exon | coding_transcript | ||
| 20310965 | 20311197 | 25351 | 25583 | - | cds | coding_transcript | ||
| 20310965 | 20311197 | 25351 | 25583 | - | exon | coding_transcript | ||
| 20310965 | 20311197 | 25351 | 25583 | - | cds | coding_transcript | ||
| 20311198 | 20311256 | 25584 | 25642 | - | intron | coding_transcript | ||
| 20311198 | 20311256 | 25584 | 25642 | - | intron | coding_transcript | ||
| 20311198 | 20311256 | 25584 | 25642 | - | intron | coding_transcript | ||
| 20311257 | 20311312 | 25643 | 25698 | - | exon | coding_transcript | ||
| 20311257 | 20311312 | 25643 | 25698 | - | cds | coding_transcript | ||
| 20311257 | 20311312 | 25643 | 25698 | - | exon | coding_transcript | ||
| 20311257 | 20311312 | 25643 | 25698 | - | cds | coding_transcript | ||
| 20311257 | 20311312 | 25643 | 25698 | - | exon | coding_transcript | ||
| 20311257 | 20311312 | 25643 | 25698 | - | cds | coding_transcript | ||
| 20311313 | 20313207 | 25699 | 27593 | - | intron | coding_transcript | ||
| 20311313 | 20313207 | 25699 | 27593 | - | intron | coding_transcript | ||
| 20311313 | 20313207 | 25699 | 27593 | - | intron | coding_transcript | ||
| 20311449 | 20312625 | 25835 | 27011 | - | gene | CG42383 | coding_transcript | |
| 20311449 | 20312625 | 25835 | 27011 | - | mrna | FBtr0299995 | coding_transcript | |
| 20311449 | 20312625 | 25835 | 27011 | - | exon | coding_transcript | ||
| 20311449 | 20311477 | 25835 | 25863 | - | three_prime_utr | coding_transcript | ||
| 20311478 | 20312539 | 25864 | 26925 | - | cds | coding_transcript | ||
| 20312540 | 20312625 | 26926 | 27011 | - | five_prime_utr | coding_transcript | ||
| 20313208 | 20313524 | 27594 | 27910 | - | exon | coding_transcript | ||
| 20313208 | 20313524 | 27594 | 27910 | - | exon | coding_transcript | ||
| 20313208 | 20313524 | 27594 | 27910 | - | exon | coding_transcript | ||
| 20313208 | 20313496 | 27594 | 27882 | - | cds | coding_transcript | ||
| 20313208 | 20313496 | 27594 | 27882 | - | cds | coding_transcript | ||
| 20313208 | 20313496 | 27594 | 27882 | - | cds | coding_transcript | ||
| 20313497 | 20313524 | 27883 | 27910 | - | five_prime_utr | coding_transcript | ||
| 20313497 | 20313524 | 27883 | 27910 | - | five_prime_utr | coding_transcript | ||
| 20313497 | 20313524 | 27883 | 27910 | - | five_prime_utr | coding_transcript | ||
| 20313525 | 20315432 | 27911 | 29818 | - | intron | coding_transcript | ||
| 20313525 | 20315432 | 27911 | 29818 | - | intron | coding_transcript | ||
| 20313525 | 20315432 | 27911 | 29818 | - | intron | coding_transcript | ||
| 20315433 | 20315910 | 29819 | 30296 | - | exon | coding_transcript | ||
| 20315433 | 20315910 | 29819 | 30296 | - | five_prime_utr | coding_transcript | ||
| 20315433 | 20315910 | 29819 | 30296 | - | exon | coding_transcript | ||
| 20315433 | 20315910 | 29819 | 30296 | - | five_prime_utr | coding_transcript | ||
| 20315433 | 20315910 | 29819 | 30296 | - | exon | coding_transcript | ||
| 20315433 | 20315910 | 29819 | 30296 | - | five_prime_utr | coding_transcript | ||
| 20317096 | 20318136 | 31482 | 32522 | - | gene | CG15873 | coding_transcript | |
| 20318867 | 20320256 | 33253 | 34642 | - | gene | Pgam5-2 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
prom[16420]::S000169_fly_pretag_fwd
AGGAGGTCGACGCGCCGAAGAGTCCCATGTATCTGAGCCACAATCTCCAAgaagtgcataccaatcaggacccgc
|
Fasta
|
|
prom[16420]::S000169_fly_pretag_rev
AAACAAATCGCATATTCGAGATGTGGGACACGCGATCTCAGATGGACTCActtgtcgtcgtcatccttgtagtca
|
Fasta
|