Clone: 77426861790443 F06

Tagged gene: Msh6
Identifier: FBgn0036486

Clone FlyFos030045(pRedFlp-Hgr)(Msh6[19627]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
15140240 15147497 12100 19357 + gene FucTA coding_transcript
15147335 15151684 19195 24606 - gene Msh6 coding_transcript
15147335 15151684 19195 24606 - mrna FBtr0075646 coding_transcript
15147335 15147911 19195 20833 - exon coding_transcript
15147335 15147764 19195 19624 - three_prime_utr coding_transcript
15147765 15147911 19625 20833 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19701 19734 - misc_recomb FRT CLC
2358 2429 19742 19813 - cds BLRP CLC
2337 2357 19814 19834 - cds TEV CLC
2313 2336 19835 19858 - cds Precision cut site CLC
2271 2312 19859 19900 - cds V5 CLC
1548 2264 19907 20623 - cds SGFP CLC
1482 1541 20630 20689 - cds 2xTY1 CLC
dmel-5.43-3L
15147912 15147971 20834 20893 - intron coding_transcript
15147972 15148457 20894 21379 - exon coding_transcript
15147972 15148457 20894 21379 - cds coding_transcript
15148458 15148525 21380 21447 - intron coding_transcript
15148526 15150133 21448 23055 - exon coding_transcript
15148526 15150133 21448 23055 - cds coding_transcript
15150134 15150197 23056 23119 - intron coding_transcript
15150198 15150527 23120 23449 - exon coding_transcript
15150198 15150527 23120 23449 - cds coding_transcript
15150528 15150585 23450 23507 - intron coding_transcript
15150586 15151684 23508 24606 - exon coding_transcript
15150586 15151587 23508 24509 - cds coding_transcript
15151588 15151684 24510 24606 - five_prime_utr coding_transcript
15152183 15154238 25105 27160 + gene Prp31 coding_transcript
15153969 15156724 26891 29646 - gene CG7011 coding_transcript
15154915 15155571 27837 28493 + gene CG6878 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Msh6[19627]::S000169_fly_pretag_rev
AAATGGGAAATGGTGTCTGGTAGCCTCAACTTTGGAGCTTCTGCACCCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
Msh6[19627]::S000169_fly_pretag_fwd
AAATAAATGCACTCAAAGATCTGCTAAAGCAGTTAAAAATGTGCCAAGTTgaagtgcataccaatcaggacccgc
 fasta Fasta