Clone: 6475152880377884 E05

Tagged gene: spn-B
Identifier: FBgn0003480

Clone FlyFos029826(pRedFlp-Hgr)(spn-B[45206]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
Whole tag sequencing no data download [show/hide details]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
10184078 10187461 12875 16258 + gene CG31320 coding_transcript
10153786 10155330 45006 47612 - gene spn-B coding_transcript
10153786 10155330 45006 47612 - mrna FBtr0082933 coding_transcript
10154668 10155330 45006 46730 - exon coding_transcript
10155133 10155330 45006 45203 - three_prime_utr coding_transcript
10154668 10155132 45204 46730 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 45280 45313 - misc_recomb FRT CLC
2358 2429 45321 45392 - cds BLRP CLC
2337 2357 45393 45413 - cds TEV CLC
2313 2336 45414 45437 - cds Precision cut site CLC
2271 2312 45438 45479 - cds V5 CLC
1548 2264 45486 46202 - cds SGFP CLC
1482 1541 46209 46268 - cds 2xTY1 CLC
dmel-5.43-3R
10154615 10154667 46731 46783 - intron coding_transcript
10154271 10154614 46784 47127 - exon coding_transcript
10154271 10154614 46784 47127 - cds coding_transcript
10154210 10154270 47128 47188 - intron coding_transcript
10154048 10154209 47189 47350 - exon coding_transcript
10154048 10154209 47189 47350 - cds coding_transcript
10153988 10154047 47351 47410 - intron coding_transcript
10153786 10153987 47411 47612 - exon coding_transcript
10153933 10153987 47411 47465 - cds coding_transcript
10153786 10153932 47466 47612 - five_prime_utr coding_transcript
10152669 10153457 47941 48729 - gene CG3321 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
spn-B[45206]::S000169_fly_pretag_rev
TTCAACAAATTAAACGATAACAAAATAAACAGAATAAATTCAATCAATCActtgtcgtcgtcatccttgtagtca
fasta Fasta
spn-B[45206]::S000169_fly_pretag_fwd
ATGTTCCAGAGCCATCTGTTCCCAGCCCACCCGCCAAAATGCGTCGACTGgaagtgcataccaatcaggacccgc
fasta Fasta