Clone: 13996837788417626 A12
Tagged gene: aralar1
Identifier: FBgn0028646
Clone | FlyFos029540(pRedFlp-Hgr)(aralar1[32857]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
26285511 | 26291458 | 13329 | 19276 | - | gene | CDase | coding_transcript | |
26282683 | 26285110 | 19677 | 22104 | + | gene | CG2224 | coding_transcript | |
26271357 | 26281589 | 23198 | 34492 | + | gene | aralar1 | coding_transcript | |
26271357 | 26281589 | 23198 | 34492 | + | mrna | FBtr0085692 | coding_transcript | |
26271357 | 26281589 | 23198 | 34492 | + | mrna | FBtr0306586 | coding_transcript | |
26281373 | 26281589 | 23198 | 23414 | + | exon | coding_transcript | ||
26281373 | 26281589 | 23198 | 23414 | + | exon | coding_transcript | ||
26281439 | 26281589 | 23198 | 23348 | + | five_prime_utr | coding_transcript | ||
26281439 | 26281589 | 23198 | 23348 | + | five_prime_utr | coding_transcript | ||
26281373 | 26281438 | 23349 | 23414 | + | cds | coding_transcript | ||
26281373 | 26281438 | 23349 | 23414 | + | cds | coding_transcript | ||
26275682 | 26281372 | 23415 | 29105 | + | intron | coding_transcript | ||
26275682 | 26281372 | 23415 | 29105 | + | intron | coding_transcript | ||
26271357 | 26279487 | 25300 | 34492 | + | mrna | FBtr0085693 | coding_transcript | |
26279150 | 26279487 | 25300 | 25637 | + | exon | coding_transcript | ||
26279168 | 26279487 | 25300 | 25619 | + | five_prime_utr | coding_transcript | ||
26279150 | 26279167 | 25620 | 25637 | + | cds | coding_transcript | ||
26275682 | 26279149 | 25638 | 29105 | + | intron | coding_transcript | ||
26271357 | 26276128 | 28659 | 34492 | + | mrna | FBtr0085694 | coding_transcript | |
26271787 | 26276128 | 28659 | 34062 | + | mrna | FBtr0085695 | coding_transcript | |
26275951 | 26276128 | 28659 | 28836 | + | exon | coding_transcript | ||
26275951 | 26276128 | 28659 | 28836 | + | exon | coding_transcript | ||
26275978 | 26276128 | 28659 | 28809 | + | five_prime_utr | coding_transcript | ||
26275978 | 26276128 | 28659 | 28809 | + | five_prime_utr | coding_transcript | ||
26275951 | 26275977 | 28810 | 28836 | + | cds | coding_transcript | ||
26275951 | 26275977 | 28810 | 28836 | + | cds | coding_transcript | ||
26275682 | 26275950 | 28837 | 29105 | + | intron | coding_transcript | ||
26275682 | 26275950 | 28837 | 29105 | + | intron | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | exon | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | cds | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | exon | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | cds | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | exon | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | cds | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | exon | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | cds | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | exon | coding_transcript | ||
26275529 | 26275681 | 29106 | 29258 | + | cds | coding_transcript | ||
26274931 | 26275528 | 29259 | 29856 | + | intron | coding_transcript | ||
26274931 | 26275528 | 29259 | 29856 | + | intron | coding_transcript | ||
26274931 | 26275528 | 29259 | 29856 | + | intron | coding_transcript | ||
26274931 | 26275528 | 29259 | 29856 | + | intron | coding_transcript | ||
26274931 | 26275528 | 29259 | 29856 | + | intron | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | exon | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | cds | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | exon | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | cds | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | exon | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | cds | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | exon | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | cds | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | exon | coding_transcript | ||
26274768 | 26274930 | 29857 | 30019 | + | cds | coding_transcript | ||
26274710 | 26274767 | 30020 | 30077 | + | intron | coding_transcript | ||
26274710 | 26274767 | 30020 | 30077 | + | intron | coding_transcript | ||
26274710 | 26274767 | 30020 | 30077 | + | intron | coding_transcript | ||
26274710 | 26274767 | 30020 | 30077 | + | intron | coding_transcript | ||
26274710 | 26274767 | 30020 | 30077 | + | intron | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | exon | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | cds | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | exon | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | cds | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | exon | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | cds | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | exon | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | cds | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | exon | coding_transcript | ||
26274618 | 26274709 | 30078 | 30169 | + | cds | coding_transcript | ||
26274552 | 26274617 | 30170 | 30235 | + | intron | coding_transcript | ||
26274552 | 26274617 | 30170 | 30235 | + | intron | coding_transcript | ||
26274552 | 26274617 | 30170 | 30235 | + | intron | coding_transcript | ||
26274552 | 26274617 | 30170 | 30235 | + | intron | coding_transcript | ||
26274552 | 26274617 | 30170 | 30235 | + | intron | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | exon | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | cds | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | exon | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | cds | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | exon | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | cds | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | exon | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | cds | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | exon | coding_transcript | ||
26274357 | 26274551 | 30236 | 30430 | + | cds | coding_transcript | ||
26274292 | 26274356 | 30431 | 30495 | + | intron | coding_transcript | ||
26274292 | 26274356 | 30431 | 30495 | + | intron | coding_transcript | ||
26274292 | 26274356 | 30431 | 30495 | + | intron | coding_transcript | ||
26274292 | 26274356 | 30431 | 30495 | + | intron | coding_transcript | ||
26274292 | 26274356 | 30431 | 30495 | + | intron | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | exon | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | cds | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | exon | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | cds | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | exon | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | cds | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | exon | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | cds | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | exon | coding_transcript | ||
26274068 | 26274291 | 30496 | 30719 | + | cds | coding_transcript | ||
26273301 | 26274067 | 30720 | 31486 | + | intron | coding_transcript | ||
26273301 | 26274067 | 30720 | 31486 | + | intron | coding_transcript | ||
26273301 | 26274067 | 30720 | 31486 | + | intron | coding_transcript | ||
26273301 | 26274067 | 30720 | 31486 | + | intron | coding_transcript | ||
26273511 | 26274067 | 30720 | 31276 | + | intron | coding_transcript | ||
26273475 | 26273510 | 31277 | 31312 | + | exon | coding_transcript | ||
26273475 | 26273510 | 31277 | 31312 | + | cds | coding_transcript | ||
26273301 | 26273474 | 31313 | 31486 | + | intron | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | exon | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | cds | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | exon | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | cds | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | exon | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | cds | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | exon | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | cds | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | exon | coding_transcript | ||
26273134 | 26273300 | 31487 | 31653 | + | cds | coding_transcript | ||
26273071 | 26273133 | 31654 | 31716 | + | intron | coding_transcript | ||
26273071 | 26273133 | 31654 | 31716 | + | intron | coding_transcript | ||
26273071 | 26273133 | 31654 | 31716 | + | intron | coding_transcript | ||
26273071 | 26273133 | 31654 | 31716 | + | intron | coding_transcript | ||
26273071 | 26273133 | 31654 | 31716 | + | intron | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | exon | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | cds | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | exon | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | cds | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | exon | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | cds | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | exon | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | cds | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | exon | coding_transcript | ||
26272952 | 26273070 | 31717 | 31835 | + | cds | coding_transcript | ||
26272896 | 26272951 | 31836 | 31891 | + | intron | coding_transcript | ||
26272896 | 26272951 | 31836 | 31891 | + | intron | coding_transcript | ||
26272896 | 26272951 | 31836 | 31891 | + | intron | coding_transcript | ||
26272896 | 26272951 | 31836 | 31891 | + | intron | coding_transcript | ||
26272896 | 26272951 | 31836 | 31891 | + | intron | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | exon | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | cds | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | exon | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | cds | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | exon | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | cds | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | exon | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | cds | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | exon | coding_transcript | ||
26272286 | 26272895 | 31892 | 32501 | + | cds | coding_transcript | ||
26272226 | 26272285 | 32502 | 32561 | + | intron | coding_transcript | ||
26272226 | 26272285 | 32502 | 32561 | + | intron | coding_transcript | ||
26272226 | 26272285 | 32502 | 32561 | + | intron | coding_transcript | ||
26272226 | 26272285 | 32502 | 32561 | + | intron | coding_transcript | ||
26272226 | 26272285 | 32502 | 32561 | + | intron | coding_transcript | ||
26271357 | 26272225 | 32562 | 34492 | + | exon | coding_transcript | ||
26271357 | 26272225 | 32562 | 34492 | + | exon | coding_transcript | ||
26271357 | 26272225 | 32562 | 34492 | + | exon | coding_transcript | ||
26271357 | 26272225 | 32562 | 34492 | + | exon | coding_transcript | ||
26271787 | 26272225 | 32562 | 34062 | + | exon | coding_transcript | ||
26271927 | 26272225 | 32562 | 33922 | + | cds | coding_transcript | ||
26271927 | 26272225 | 32562 | 33922 | + | cds | coding_transcript | ||
26271927 | 26272225 | 32562 | 33922 | + | cds | coding_transcript | ||
26271927 | 26272225 | 32562 | 33922 | + | cds | coding_transcript | ||
26271927 | 26272225 | 32562 | 33922 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 32858 | 32917 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 32924 | 33640 | + | cds | SGFP | CLC | |
2271 | 2312 | 33647 | 33688 | + | cds | V5 | CLC | |
2313 | 2336 | 33689 | 33712 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 33713 | 33733 | + | cds | TEV | CLC | |
2358 | 2429 | 33734 | 33805 | + | cds | BLRP | CLC | |
3813 | 3846 | 33813 | 33846 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
26271357 | 26271926 | 33923 | 34492 | + | three_prime_utr | coding_transcript | ||
26271357 | 26271926 | 33923 | 34492 | + | three_prime_utr | coding_transcript | ||
26271357 | 26271926 | 33923 | 34492 | + | three_prime_utr | coding_transcript | ||
26271357 | 26271926 | 33923 | 34492 | + | three_prime_utr | coding_transcript | ||
26271787 | 26271926 | 33923 | 34062 | + | three_prime_utr | coding_transcript | ||
26269871 | 26271031 | 34818 | 35978 | + | gene | Osi23 | coding_transcript | |
26261033 | 26269321 | 36528 | 44816 | + | gene | CG15537 | coding_transcript | |
26257786 | 26260861 | 44988 | 48063 | - | gene | CG15534 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
aralar1[32857]::S000169_fly_pretag_rev
CATTCCGTAGACTACGTGGCGCTTGGCAGGCGGTGGCGCCAATATAATCActtgtcgtcgtcatccttgtagtca
|
Fasta |
aralar1[32857]::S000169_fly_pretag_fwd
GATTTGGACGCGGAGTAACCGCTGCCTCGCCCTCGACGGCCACGGGATCCgaagtgcataccaatcaggacccgc
|
Fasta |