Clone: 13996837788417626 A12

Tagged gene: aralar1
Identifier: FBgn0028646

Clone FlyFos029540(pRedFlp-Hgr)(aralar1[32857]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
26285511 26291458 13329 19276 - gene CDase coding_transcript
26282683 26285110 19677 22104 + gene CG2224 coding_transcript
26271357 26281589 23198 34492 + gene aralar1 coding_transcript
26271357 26281589 23198 34492 + mrna FBtr0085692 coding_transcript
26271357 26281589 23198 34492 + mrna FBtr0306586 coding_transcript
26281373 26281589 23198 23414 + exon coding_transcript
26281373 26281589 23198 23414 + exon coding_transcript
26281439 26281589 23198 23348 + five_prime_utr coding_transcript
26281439 26281589 23198 23348 + five_prime_utr coding_transcript
26281373 26281438 23349 23414 + cds coding_transcript
26281373 26281438 23349 23414 + cds coding_transcript
26275682 26281372 23415 29105 + intron coding_transcript
26275682 26281372 23415 29105 + intron coding_transcript
26271357 26279487 25300 34492 + mrna FBtr0085693 coding_transcript
26279150 26279487 25300 25637 + exon coding_transcript
26279168 26279487 25300 25619 + five_prime_utr coding_transcript
26279150 26279167 25620 25637 + cds coding_transcript
26275682 26279149 25638 29105 + intron coding_transcript
26271357 26276128 28659 34492 + mrna FBtr0085694 coding_transcript
26271787 26276128 28659 34062 + mrna FBtr0085695 coding_transcript
26275951 26276128 28659 28836 + exon coding_transcript
26275951 26276128 28659 28836 + exon coding_transcript
26275978 26276128 28659 28809 + five_prime_utr coding_transcript
26275978 26276128 28659 28809 + five_prime_utr coding_transcript
26275951 26275977 28810 28836 + cds coding_transcript
26275951 26275977 28810 28836 + cds coding_transcript
26275682 26275950 28837 29105 + intron coding_transcript
26275682 26275950 28837 29105 + intron coding_transcript
26275529 26275681 29106 29258 + exon coding_transcript
26275529 26275681 29106 29258 + cds coding_transcript
26275529 26275681 29106 29258 + exon coding_transcript
26275529 26275681 29106 29258 + cds coding_transcript
26275529 26275681 29106 29258 + exon coding_transcript
26275529 26275681 29106 29258 + cds coding_transcript
26275529 26275681 29106 29258 + exon coding_transcript
26275529 26275681 29106 29258 + cds coding_transcript
26275529 26275681 29106 29258 + exon coding_transcript
26275529 26275681 29106 29258 + cds coding_transcript
26274931 26275528 29259 29856 + intron coding_transcript
26274931 26275528 29259 29856 + intron coding_transcript
26274931 26275528 29259 29856 + intron coding_transcript
26274931 26275528 29259 29856 + intron coding_transcript
26274931 26275528 29259 29856 + intron coding_transcript
26274768 26274930 29857 30019 + exon coding_transcript
26274768 26274930 29857 30019 + cds coding_transcript
26274768 26274930 29857 30019 + exon coding_transcript
26274768 26274930 29857 30019 + cds coding_transcript
26274768 26274930 29857 30019 + exon coding_transcript
26274768 26274930 29857 30019 + cds coding_transcript
26274768 26274930 29857 30019 + exon coding_transcript
26274768 26274930 29857 30019 + cds coding_transcript
26274768 26274930 29857 30019 + exon coding_transcript
26274768 26274930 29857 30019 + cds coding_transcript
26274710 26274767 30020 30077 + intron coding_transcript
26274710 26274767 30020 30077 + intron coding_transcript
26274710 26274767 30020 30077 + intron coding_transcript
26274710 26274767 30020 30077 + intron coding_transcript
26274710 26274767 30020 30077 + intron coding_transcript
26274618 26274709 30078 30169 + exon coding_transcript
26274618 26274709 30078 30169 + cds coding_transcript
26274618 26274709 30078 30169 + exon coding_transcript
26274618 26274709 30078 30169 + cds coding_transcript
26274618 26274709 30078 30169 + exon coding_transcript
26274618 26274709 30078 30169 + cds coding_transcript
26274618 26274709 30078 30169 + exon coding_transcript
26274618 26274709 30078 30169 + cds coding_transcript
26274618 26274709 30078 30169 + exon coding_transcript
26274618 26274709 30078 30169 + cds coding_transcript
26274552 26274617 30170 30235 + intron coding_transcript
26274552 26274617 30170 30235 + intron coding_transcript
26274552 26274617 30170 30235 + intron coding_transcript
26274552 26274617 30170 30235 + intron coding_transcript
26274552 26274617 30170 30235 + intron coding_transcript
26274357 26274551 30236 30430 + exon coding_transcript
26274357 26274551 30236 30430 + cds coding_transcript
26274357 26274551 30236 30430 + exon coding_transcript
26274357 26274551 30236 30430 + cds coding_transcript
26274357 26274551 30236 30430 + exon coding_transcript
26274357 26274551 30236 30430 + cds coding_transcript
26274357 26274551 30236 30430 + exon coding_transcript
26274357 26274551 30236 30430 + cds coding_transcript
26274357 26274551 30236 30430 + exon coding_transcript
26274357 26274551 30236 30430 + cds coding_transcript
26274292 26274356 30431 30495 + intron coding_transcript
26274292 26274356 30431 30495 + intron coding_transcript
26274292 26274356 30431 30495 + intron coding_transcript
26274292 26274356 30431 30495 + intron coding_transcript
26274292 26274356 30431 30495 + intron coding_transcript
26274068 26274291 30496 30719 + exon coding_transcript
26274068 26274291 30496 30719 + cds coding_transcript
26274068 26274291 30496 30719 + exon coding_transcript
26274068 26274291 30496 30719 + cds coding_transcript
26274068 26274291 30496 30719 + exon coding_transcript
26274068 26274291 30496 30719 + cds coding_transcript
26274068 26274291 30496 30719 + exon coding_transcript
26274068 26274291 30496 30719 + cds coding_transcript
26274068 26274291 30496 30719 + exon coding_transcript
26274068 26274291 30496 30719 + cds coding_transcript
26273301 26274067 30720 31486 + intron coding_transcript
26273301 26274067 30720 31486 + intron coding_transcript
26273301 26274067 30720 31486 + intron coding_transcript
26273301 26274067 30720 31486 + intron coding_transcript
26273511 26274067 30720 31276 + intron coding_transcript
26273475 26273510 31277 31312 + exon coding_transcript
26273475 26273510 31277 31312 + cds coding_transcript
26273301 26273474 31313 31486 + intron coding_transcript
26273134 26273300 31487 31653 + exon coding_transcript
26273134 26273300 31487 31653 + cds coding_transcript
26273134 26273300 31487 31653 + exon coding_transcript
26273134 26273300 31487 31653 + cds coding_transcript
26273134 26273300 31487 31653 + exon coding_transcript
26273134 26273300 31487 31653 + cds coding_transcript
26273134 26273300 31487 31653 + exon coding_transcript
26273134 26273300 31487 31653 + cds coding_transcript
26273134 26273300 31487 31653 + exon coding_transcript
26273134 26273300 31487 31653 + cds coding_transcript
26273071 26273133 31654 31716 + intron coding_transcript
26273071 26273133 31654 31716 + intron coding_transcript
26273071 26273133 31654 31716 + intron coding_transcript
26273071 26273133 31654 31716 + intron coding_transcript
26273071 26273133 31654 31716 + intron coding_transcript
26272952 26273070 31717 31835 + exon coding_transcript
26272952 26273070 31717 31835 + cds coding_transcript
26272952 26273070 31717 31835 + exon coding_transcript
26272952 26273070 31717 31835 + cds coding_transcript
26272952 26273070 31717 31835 + exon coding_transcript
26272952 26273070 31717 31835 + cds coding_transcript
26272952 26273070 31717 31835 + exon coding_transcript
26272952 26273070 31717 31835 + cds coding_transcript
26272952 26273070 31717 31835 + exon coding_transcript
26272952 26273070 31717 31835 + cds coding_transcript
26272896 26272951 31836 31891 + intron coding_transcript
26272896 26272951 31836 31891 + intron coding_transcript
26272896 26272951 31836 31891 + intron coding_transcript
26272896 26272951 31836 31891 + intron coding_transcript
26272896 26272951 31836 31891 + intron coding_transcript
26272286 26272895 31892 32501 + exon coding_transcript
26272286 26272895 31892 32501 + cds coding_transcript
26272286 26272895 31892 32501 + exon coding_transcript
26272286 26272895 31892 32501 + cds coding_transcript
26272286 26272895 31892 32501 + exon coding_transcript
26272286 26272895 31892 32501 + cds coding_transcript
26272286 26272895 31892 32501 + exon coding_transcript
26272286 26272895 31892 32501 + cds coding_transcript
26272286 26272895 31892 32501 + exon coding_transcript
26272286 26272895 31892 32501 + cds coding_transcript
26272226 26272285 32502 32561 + intron coding_transcript
26272226 26272285 32502 32561 + intron coding_transcript
26272226 26272285 32502 32561 + intron coding_transcript
26272226 26272285 32502 32561 + intron coding_transcript
26272226 26272285 32502 32561 + intron coding_transcript
26271357 26272225 32562 34492 + exon coding_transcript
26271357 26272225 32562 34492 + exon coding_transcript
26271357 26272225 32562 34492 + exon coding_transcript
26271357 26272225 32562 34492 + exon coding_transcript
26271787 26272225 32562 34062 + exon coding_transcript
26271927 26272225 32562 33922 + cds coding_transcript
26271927 26272225 32562 33922 + cds coding_transcript
26271927 26272225 32562 33922 + cds coding_transcript
26271927 26272225 32562 33922 + cds coding_transcript
26271927 26272225 32562 33922 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 32858 32917 + cds 2xTY1 CLC
1548 2264 32924 33640 + cds SGFP CLC
2271 2312 33647 33688 + cds V5 CLC
2313 2336 33689 33712 + cds Precision cut site CLC
2337 2357 33713 33733 + cds TEV CLC
2358 2429 33734 33805 + cds BLRP CLC
3813 3846 33813 33846 + misc_recomb FRT CLC
dmel-5.43-3R
26271357 26271926 33923 34492 + three_prime_utr coding_transcript
26271357 26271926 33923 34492 + three_prime_utr coding_transcript
26271357 26271926 33923 34492 + three_prime_utr coding_transcript
26271357 26271926 33923 34492 + three_prime_utr coding_transcript
26271787 26271926 33923 34062 + three_prime_utr coding_transcript
26269871 26271031 34818 35978 + gene Osi23 coding_transcript
26261033 26269321 36528 44816 + gene CG15537 coding_transcript
26257786 26260861 44988 48063 - gene CG15534 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
aralar1[32857]::S000169_fly_pretag_rev
CATTCCGTAGACTACGTGGCGCTTGGCAGGCGGTGGCGCCAATATAATCActtgtcgtcgtcatccttgtagtca
fasta Fasta
aralar1[32857]::S000169_fly_pretag_fwd
GATTTGGACGCGGAGTAACCGCTGCCTCGCCCTCGACGGCCACGGGATCCgaagtgcataccaatcaggacccgc
fasta Fasta