Clone: 13996837788417626 D11
Tagged gene: CG5521
Identifier: FBgn0039466
Clone | FlyFos029533(pRedFlp-Hgr)(CG5521[31005]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
22787446 | 22790547 | 16187 | 19288 | - | gene | Tsp97E | coding_transcript | |
22790866 | 22792194 | 19607 | 20935 | - | gene | Gr97a | coding_transcript | |
22792652 | 22802267 | 21393 | 32070 | + | gene | CG5521 | coding_transcript | |
22792652 | 22802267 | 21393 | 32070 | + | mrna | FBtr0085069 | coding_transcript | |
22792652 | 22802267 | 21393 | 32070 | + | mrna | FBtr0301134 | coding_transcript | |
22792652 | 22793271 | 21393 | 22012 | + | exon | coding_transcript | ||
22792652 | 22793271 | 21393 | 22012 | + | exon | coding_transcript | ||
22792652 | 22793165 | 21393 | 21906 | + | five_prime_utr | coding_transcript | ||
22792652 | 22793165 | 21393 | 21906 | + | five_prime_utr | coding_transcript | ||
22793166 | 22793271 | 21907 | 22012 | + | cds | coding_transcript | ||
22793166 | 22793271 | 21907 | 22012 | + | cds | coding_transcript | ||
22793272 | 22795406 | 22013 | 24147 | + | intron | coding_transcript | ||
22793272 | 22795406 | 22013 | 24147 | + | intron | coding_transcript | ||
22795407 | 22795517 | 24148 | 24258 | + | exon | coding_transcript | ||
22795407 | 22795517 | 24148 | 24258 | + | cds | coding_transcript | ||
22795407 | 22795517 | 24148 | 24258 | + | exon | coding_transcript | ||
22795407 | 22795517 | 24148 | 24258 | + | cds | coding_transcript | ||
22795518 | 22796373 | 24259 | 25114 | + | intron | coding_transcript | ||
22795518 | 22796048 | 24259 | 24789 | + | intron | coding_transcript | ||
22796049 | 22796066 | 24790 | 24807 | + | exon | coding_transcript | ||
22796049 | 22796066 | 24790 | 24807 | + | cds | coding_transcript | ||
22796067 | 22796373 | 24808 | 25114 | + | intron | coding_transcript | ||
22796374 | 22796545 | 25115 | 25286 | + | exon | coding_transcript | ||
22796374 | 22796545 | 25115 | 25286 | + | cds | coding_transcript | ||
22796374 | 22796545 | 25115 | 25286 | + | exon | coding_transcript | ||
22796374 | 22796545 | 25115 | 25286 | + | cds | coding_transcript | ||
22796546 | 22796604 | 25287 | 25345 | + | intron | coding_transcript | ||
22796546 | 22796604 | 25287 | 25345 | + | intron | coding_transcript | ||
22796605 | 22797571 | 25346 | 26312 | + | exon | coding_transcript | ||
22796605 | 22797571 | 25346 | 26312 | + | cds | coding_transcript | ||
22796605 | 22797571 | 25346 | 26312 | + | exon | coding_transcript | ||
22796605 | 22797571 | 25346 | 26312 | + | cds | coding_transcript | ||
22797572 | 22797631 | 26313 | 26372 | + | intron | coding_transcript | ||
22797572 | 22797631 | 26313 | 26372 | + | intron | coding_transcript | ||
22797632 | 22801698 | 26373 | 30439 | + | exon | coding_transcript | ||
22797632 | 22801698 | 26373 | 30439 | + | cds | coding_transcript | ||
22797632 | 22801698 | 26373 | 30439 | + | exon | coding_transcript | ||
22797632 | 22801698 | 26373 | 30439 | + | cds | coding_transcript | ||
22801699 | 22801754 | 30440 | 30495 | + | intron | coding_transcript | ||
22801699 | 22801754 | 30440 | 30495 | + | intron | coding_transcript | ||
22801755 | 22801951 | 30496 | 30692 | + | exon | coding_transcript | ||
22801755 | 22801951 | 30496 | 30692 | + | cds | coding_transcript | ||
22801755 | 22801951 | 30496 | 30692 | + | exon | coding_transcript | ||
22801755 | 22801951 | 30496 | 30692 | + | cds | coding_transcript | ||
22801952 | 22802010 | 30693 | 30751 | + | intron | coding_transcript | ||
22801952 | 22802010 | 30693 | 30751 | + | intron | coding_transcript | ||
22802011 | 22802267 | 30752 | 32070 | + | exon | coding_transcript | ||
22802011 | 22802267 | 30752 | 32070 | + | cds | coding_transcript | ||
22802011 | 22802267 | 30752 | 32070 | + | exon | coding_transcript | ||
22802011 | 22802267 | 30752 | 32070 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 31006 | 31065 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 31072 | 31788 | + | cds | SGFP | CLC | |
2271 | 2312 | 31795 | 31836 | + | cds | V5 | CLC | |
2313 | 2336 | 31837 | 31860 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 31861 | 31881 | + | cds | TEV | CLC | |
2358 | 2429 | 31882 | 31953 | + | cds | BLRP | CLC | |
3813 | 3846 | 31961 | 31994 | + | misc_recomb | FRT | CLC |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG5521[31005]::S000169_fly_pretag_rev
GGGAATGGGTGCAGGTAGTACCAGGAATCGGAGGAAAGGGACACGTTTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG5521[31005]::S000169_fly_pretag_fwd
GCGGTGACACGCCGCCCGAGAGCCCAACATTGCCGCAGCGACGCTTCAAAgaagtgcataccaatcaggacccgc
|
Fasta |