Clone: 13996837788417626 H09

Tagged gene: CG5515
Identifier: FBgn0039163

Clone FlyFos029507(pRedFlp-Hgr)(CG5515[36857]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
20019588 20022602 27783 30797 - gene CG6204 coding_transcript
20014770 20019145 31240 35615 + gene CG5524 coding_transcript
20013444 20014663 35722 38003 + gene CG5515 coding_transcript
20013444 20014663 35722 38003 + mrna FBtr0084574 coding_transcript
20014238 20014663 35722 36147 + exon coding_transcript
20014314 20014663 35722 36071 + five_prime_utr coding_transcript
20013444 20014596 35789 38003 + mrna FBtr0084575 coding_transcript
20014392 20014596 35789 35993 + exon coding_transcript
20014392 20014596 35789 35993 + five_prime_utr coding_transcript
20014330 20014391 35994 36055 + intron coding_transcript
20014238 20014329 36056 36147 + exon coding_transcript
20014314 20014329 36056 36071 + five_prime_utr coding_transcript
20014238 20014313 36072 36147 + cds coding_transcript
20014238 20014313 36072 36147 + cds coding_transcript
20014184 20014237 36148 36201 + intron coding_transcript
20014184 20014237 36148 36201 + intron coding_transcript
20013444 20014183 36202 38003 + exon coding_transcript
20013444 20014183 36202 38003 + exon coding_transcript
20013525 20014183 36202 37922 + cds coding_transcript
20013525 20014183 36202 37922 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 36858 36917 + cds 2xTY1 CLC
1548 2264 36924 37640 + cds SGFP CLC
2271 2312 37647 37688 + cds V5 CLC
2313 2336 37689 37712 + cds Precision cut site CLC
2337 2357 37713 37733 + cds TEV CLC
2358 2429 37734 37805 + cds BLRP CLC
3813 3846 37813 37846 + misc_recomb FRT CLC
dmel-5.43-3R
20013444 20013524 37923 38003 + three_prime_utr coding_transcript
20013444 20013524 37923 38003 + three_prime_utr coding_transcript
20012087 20013515 37932 39360 - gene CHORD coding_transcript
20013453 20013515 37932 37994 - three_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5515[36857]::S000169_fly_pretag_rev
ATAAAATACACGAATTTGCCTTTGAGTAGTTTGACACAGTTTGTAGCTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG5515[36857]::S000169_fly_pretag_fwd
ATGACGATGATGATGAGGATTGGGTGCCCGGGGCGGACGACGACGACGATgaagtgcataccaatcaggacccgc
fasta Fasta