Clone: 13996837788417626 G09
Tagged gene: CG5524
Identifier: FBgn0039164
Clone | FlyFos029507(pRedFlp-Hgr)(CG5524[35512]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
20019588 | 20022602 | 27783 | 30797 | - | gene | CG6204 | coding_transcript | |
20014770 | 20019145 | 31240 | 36677 | + | gene | CG5524 | coding_transcript | |
20014770 | 20019145 | 31240 | 36677 | + | mrna | FBtr0084573 | coding_transcript | |
20019034 | 20019145 | 31240 | 31351 | + | exon | coding_transcript | ||
20019034 | 20019145 | 31240 | 31351 | + | five_prime_utr | coding_transcript | ||
20018967 | 20019033 | 31352 | 31418 | + | intron | coding_transcript | ||
20018704 | 20018966 | 31419 | 31681 | + | exon | coding_transcript | ||
20018956 | 20018966 | 31419 | 31429 | + | five_prime_utr | coding_transcript | ||
20018704 | 20018955 | 31430 | 31681 | + | cds | coding_transcript | ||
20018647 | 20018703 | 31682 | 31738 | + | intron | coding_transcript | ||
20018427 | 20018646 | 31739 | 31958 | + | exon | coding_transcript | ||
20018427 | 20018646 | 31739 | 31958 | + | cds | coding_transcript | ||
20018373 | 20018426 | 31959 | 32012 | + | intron | coding_transcript | ||
20018099 | 20018372 | 32013 | 32286 | + | exon | coding_transcript | ||
20018099 | 20018372 | 32013 | 32286 | + | cds | coding_transcript | ||
20018040 | 20018098 | 32287 | 32345 | + | intron | coding_transcript | ||
20017913 | 20018039 | 32346 | 32472 | + | exon | coding_transcript | ||
20017913 | 20018039 | 32346 | 32472 | + | cds | coding_transcript | ||
20017846 | 20017912 | 32473 | 32539 | + | intron | coding_transcript | ||
20017768 | 20017845 | 32540 | 32617 | + | exon | coding_transcript | ||
20017768 | 20017845 | 32540 | 32617 | + | cds | coding_transcript | ||
20017710 | 20017767 | 32618 | 32675 | + | intron | coding_transcript | ||
20017537 | 20017709 | 32676 | 32848 | + | exon | coding_transcript | ||
20017537 | 20017709 | 32676 | 32848 | + | cds | coding_transcript | ||
20017482 | 20017536 | 32849 | 32903 | + | intron | coding_transcript | ||
20017084 | 20017481 | 32904 | 33301 | + | exon | coding_transcript | ||
20017084 | 20017481 | 32904 | 33301 | + | cds | coding_transcript | ||
20017028 | 20017083 | 33302 | 33357 | + | intron | coding_transcript | ||
20016628 | 20017027 | 33358 | 33757 | + | exon | coding_transcript | ||
20016628 | 20017027 | 33358 | 33757 | + | cds | coding_transcript | ||
20016558 | 20016627 | 33758 | 33827 | + | intron | coding_transcript | ||
20016095 | 20016557 | 33828 | 34290 | + | exon | coding_transcript | ||
20016095 | 20016557 | 33828 | 34290 | + | cds | coding_transcript | ||
20016038 | 20016094 | 34291 | 34347 | + | intron | coding_transcript | ||
20015426 | 20016037 | 34348 | 34959 | + | exon | coding_transcript | ||
20015426 | 20016037 | 34348 | 34959 | + | cds | coding_transcript | ||
20015363 | 20015425 | 34960 | 35022 | + | intron | coding_transcript | ||
20015144 | 20015362 | 35023 | 35241 | + | exon | coding_transcript | ||
20015144 | 20015362 | 35023 | 35241 | + | cds | coding_transcript | ||
20015083 | 20015143 | 35242 | 35302 | + | intron | coding_transcript | ||
20014952 | 20015082 | 35303 | 35433 | + | exon | coding_transcript | ||
20014952 | 20015082 | 35303 | 35433 | + | cds | coding_transcript | ||
20014892 | 20014951 | 35434 | 35493 | + | intron | coding_transcript | ||
20014770 | 20014891 | 35494 | 36677 | + | exon | coding_transcript | ||
20014870 | 20014891 | 35494 | 36577 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 35513 | 35572 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 35579 | 36295 | + | cds | SGFP | CLC | |
2271 | 2312 | 36302 | 36343 | + | cds | V5 | CLC | |
2313 | 2336 | 36344 | 36367 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 36368 | 36388 | + | cds | TEV | CLC | |
2358 | 2429 | 36389 | 36460 | + | cds | BLRP | CLC | |
3813 | 3846 | 36468 | 36501 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
20014770 | 20014869 | 36578 | 36677 | + | three_prime_utr | coding_transcript | ||
20013444 | 20014663 | 36784 | 38003 | + | gene | CG5515 | coding_transcript | |
20012087 | 20013515 | 37932 | 39360 | - | gene | CHORD | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG5524[35512]::S000169_fly_pretag_fwd
ACCACATTAATTGCATTCAATTTATTTGCAGACTTGAGGCTCCTGAACGGgaagtgcataccaatcaggacccgc
|
Fasta |
CG5524[35512]::S000169_fly_pretag_rev
ATGCTTCGTCGCCCGCAACTTTTAAGTTAATACACTATTTTAAAATGTTActtgtcgtcgtcatccttgtagtca
|
Fasta |