Clone: 13996837788417626 G07
Tagged gene: blot
Identifier: FBgn0027660
Clone | FlyFos029492(pRedFlp-Hgr)(blot[38652]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
17414887 | 17418312 | 9997 | 13422 | + | gene | sec3 | coding_transcript | |
17389124 | 17414612 | 13697 | 40247 | + | gene | blot | coding_transcript | |
17389124 | 17414612 | 13697 | 40247 | + | mrna | FBtr0075232 | coding_transcript | |
17414454 | 17414612 | 13697 | 13855 | + | exon | coding_transcript | ||
17414454 | 17414612 | 13697 | 13855 | + | five_prime_utr | coding_transcript | ||
17402973 | 17414453 | 13856 | 25336 | + | intron | coding_transcript | ||
17389124 | 17408861 | 19448 | 40247 | + | mrna | FBtr0075233 | coding_transcript | |
17408321 | 17408861 | 19448 | 19988 | + | exon | coding_transcript | ||
17408321 | 17408861 | 19448 | 19988 | + | five_prime_utr | coding_transcript | ||
17402973 | 17408320 | 19989 | 25336 | + | intron | coding_transcript | ||
17402325 | 17402972 | 25337 | 25984 | + | exon | coding_transcript | ||
17402325 | 17402972 | 25337 | 25984 | + | exon | coding_transcript | ||
17402964 | 17402972 | 25337 | 25345 | + | five_prime_utr | coding_transcript | ||
17402964 | 17402972 | 25337 | 25345 | + | five_prime_utr | coding_transcript | ||
17402325 | 17402963 | 25346 | 25984 | + | cds | coding_transcript | ||
17402325 | 17402963 | 25346 | 25984 | + | cds | coding_transcript | ||
17394943 | 17402324 | 25985 | 33366 | + | intron | coding_transcript | ||
17394943 | 17402324 | 25985 | 33366 | + | intron | coding_transcript | ||
17389124 | 17399621 | 28688 | 40247 | + | mrna | FBtr0075234 | coding_transcript | |
17399510 | 17399621 | 28688 | 28799 | + | exon | coding_transcript | ||
17399528 | 17399621 | 28688 | 28781 | + | five_prime_utr | coding_transcript | ||
17399510 | 17399527 | 28782 | 28799 | + | cds | coding_transcript | ||
17394943 | 17399509 | 28800 | 33366 | + | intron | coding_transcript | ||
17389124 | 17396834 | 31475 | 40247 | + | mrna | FBtr0075235 | coding_transcript | |
17396593 | 17396834 | 31475 | 31716 | + | exon | coding_transcript | ||
17396731 | 17396834 | 31475 | 31578 | + | five_prime_utr | coding_transcript | ||
17396593 | 17396730 | 31579 | 31716 | + | cds | coding_transcript | ||
17394943 | 17396592 | 31717 | 33366 | + | intron | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | exon | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | cds | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | exon | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | cds | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | exon | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | cds | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | exon | coding_transcript | ||
17394711 | 17394942 | 33367 | 33598 | + | cds | coding_transcript | ||
17391833 | 17394710 | 33599 | 36476 | + | intron | coding_transcript | ||
17391833 | 17394710 | 33599 | 36476 | + | intron | coding_transcript | ||
17391833 | 17394710 | 33599 | 36476 | + | intron | coding_transcript | ||
17391833 | 17394710 | 33599 | 36476 | + | intron | coding_transcript | ||
17393447 | 17394448 | 33861 | 34862 | + | gene | noe | coding_transcript | |
17393447 | 17394448 | 33861 | 34862 | + | mrna | FBtr0110845 | coding_transcript | |
17393447 | 17394448 | 33861 | 34862 | + | exon | coding_transcript | ||
17393546 | 17394448 | 33861 | 34763 | + | mrna | FBtr0110844 | coding_transcript | |
17393546 | 17394448 | 33861 | 34763 | + | exon | coding_transcript | ||
17394291 | 17394448 | 33861 | 34018 | + | five_prime_utr | coding_transcript | ||
17394291 | 17394448 | 33861 | 34018 | + | five_prime_utr | coding_transcript | ||
17394066 | 17394290 | 34019 | 34243 | + | cds | coding_transcript | ||
17394066 | 17394290 | 34019 | 34243 | + | cds | coding_transcript | ||
17393447 | 17394065 | 34244 | 34862 | + | three_prime_utr | coding_transcript | ||
17393546 | 17394065 | 34244 | 34763 | + | three_prime_utr | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | exon | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | cds | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | exon | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | cds | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | exon | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | cds | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | exon | coding_transcript | ||
17391687 | 17391832 | 36477 | 36622 | + | cds | coding_transcript | ||
17391632 | 17391686 | 36623 | 36677 | + | intron | coding_transcript | ||
17391632 | 17391686 | 36623 | 36677 | + | intron | coding_transcript | ||
17391632 | 17391686 | 36623 | 36677 | + | intron | coding_transcript | ||
17391632 | 17391686 | 36623 | 36677 | + | intron | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | exon | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | cds | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | exon | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | cds | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | exon | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | cds | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | exon | coding_transcript | ||
17391495 | 17391631 | 36678 | 36814 | + | cds | coding_transcript | ||
17391431 | 17391494 | 36815 | 36878 | + | intron | coding_transcript | ||
17391431 | 17391494 | 36815 | 36878 | + | intron | coding_transcript | ||
17391431 | 17391494 | 36815 | 36878 | + | intron | coding_transcript | ||
17391431 | 17391494 | 36815 | 36878 | + | intron | coding_transcript | ||
17389124 | 17391430 | 36879 | 40247 | + | exon | coding_transcript | ||
17389124 | 17391430 | 36879 | 40247 | + | exon | coding_transcript | ||
17389124 | 17391430 | 36879 | 40247 | + | exon | coding_transcript | ||
17389124 | 17391430 | 36879 | 40247 | + | exon | coding_transcript | ||
17389654 | 17391430 | 36879 | 39717 | + | cds | coding_transcript | ||
17389654 | 17391430 | 36879 | 39717 | + | cds | coding_transcript | ||
17389654 | 17391430 | 36879 | 39717 | + | cds | coding_transcript | ||
17389654 | 17391430 | 36879 | 39717 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 38653 | 38712 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 38719 | 39435 | + | cds | SGFP | CLC | |
2271 | 2312 | 39442 | 39483 | + | cds | V5 | CLC | |
2313 | 2336 | 39484 | 39507 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 39508 | 39528 | + | cds | TEV | CLC | |
2358 | 2429 | 39529 | 39600 | + | cds | BLRP | CLC | |
3813 | 3846 | 39608 | 39641 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3L | ||||||||
17389124 | 17389653 | 39718 | 40247 | + | three_prime_utr | coding_transcript | ||
17389124 | 17389653 | 39718 | 40247 | + | three_prime_utr | coding_transcript | ||
17389124 | 17389653 | 39718 | 40247 | + | three_prime_utr | coding_transcript | ||
17389124 | 17389653 | 39718 | 40247 | + | three_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
blot[38652]::S000169_fly_pretag_rev
TTTTGAATGTGAATGCTTCGTTTCCTACTCCTGGTCCTCCCCTGATTTCActtgtcgtcgtcatccttgtagtca
|
Fasta |
blot[38652]::S000169_fly_pretag_fwd
TTTGCTGGCGGAAGTTCAACGTCAATCCGGAAGAGTATTCCACGGAGCTGgaagtgcataccaatcaggacccgc
|
Fasta |