Clone: 13996837788417626 A07
Tagged gene: Lam
Identifier: FBgn0002525
Clone | FlyFos029473(pRedFlp-Hgr)(Lam[20245]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
5553897 | 5555137 | 10614 | 11854 | - | gene | CG14017 | coding_transcript | |
5552843 | 5553848 | 11903 | 12908 | + | gene | CG14013 | coding_transcript | |
5552046 | 5552648 | 13103 | 13705 | - | gene | CG18269 | coding_transcript | |
5549709 | 5550835 | 14916 | 16042 | + | gene | CG14014 | coding_transcript | |
5547099 | 5549614 | 16137 | 18652 | - | gene | Oscillin | coding_transcript | |
5542544 | 5546642 | 19109 | 24269 | - | gene | Lam | coding_transcript | |
5542544 | 5546642 | 19109 | 24269 | - | mrna | FBtr0079100 | coding_transcript | |
5542659 | 5546642 | 19109 | 24154 | - | mrna | FBtr0307058 | coding_transcript | |
5542659 | 5546642 | 19109 | 24154 | - | mrna | FBtr0307059 | coding_transcript | |
5544807 | 5546642 | 19109 | 22006 | - | exon | coding_transcript | ||
5544807 | 5546642 | 19109 | 22006 | - | exon | coding_transcript | ||
5544807 | 5546642 | 19109 | 22006 | - | exon | coding_transcript | ||
5545509 | 5546642 | 19109 | 20242 | - | three_prime_utr | coding_transcript | ||
5545509 | 5546642 | 19109 | 20242 | - | three_prime_utr | coding_transcript | ||
5545509 | 5546642 | 19109 | 20242 | - | three_prime_utr | coding_transcript | ||
5544807 | 5545508 | 20243 | 22006 | - | cds | coding_transcript | ||
5544807 | 5545508 | 20243 | 22006 | - | cds | coding_transcript | ||
5544807 | 5545508 | 20243 | 22006 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 20319 | 20352 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 20360 | 20431 | - | cds | BLRP | CLC | |
2337 | 2357 | 20432 | 20452 | - | cds | TEV | CLC | |
2313 | 2336 | 20453 | 20476 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 20477 | 20518 | - | cds | V5 | CLC | |
1548 | 2264 | 20525 | 21241 | - | cds | SGFP | CLC | |
1482 | 1541 | 21248 | 21307 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2L | ||||||||
5544742 | 5544806 | 22007 | 22071 | - | intron | coding_transcript | ||
5544742 | 5544806 | 22007 | 22071 | - | intron | coding_transcript | ||
5544742 | 5544806 | 22007 | 22071 | - | intron | coding_transcript | ||
5544038 | 5544741 | 22072 | 22775 | - | exon | coding_transcript | ||
5544038 | 5544741 | 22072 | 22775 | - | cds | coding_transcript | ||
5544038 | 5544741 | 22072 | 22775 | - | exon | coding_transcript | ||
5544038 | 5544741 | 22072 | 22775 | - | cds | coding_transcript | ||
5544038 | 5544741 | 22072 | 22775 | - | exon | coding_transcript | ||
5544038 | 5544741 | 22072 | 22775 | - | cds | coding_transcript | ||
5543795 | 5544037 | 22776 | 23018 | - | intron | coding_transcript | ||
5543795 | 5544037 | 22776 | 23018 | - | intron | coding_transcript | ||
5543795 | 5544037 | 22776 | 23018 | - | intron | coding_transcript | ||
5543325 | 5543794 | 23019 | 23488 | - | exon | coding_transcript | ||
5543325 | 5543794 | 23019 | 23488 | - | exon | coding_transcript | ||
5543325 | 5543794 | 23019 | 23488 | - | exon | coding_transcript | ||
5543332 | 5543794 | 23019 | 23481 | - | cds | coding_transcript | ||
5543332 | 5543794 | 23019 | 23481 | - | cds | coding_transcript | ||
5543332 | 5543794 | 23019 | 23481 | - | cds | coding_transcript | ||
5543325 | 5543331 | 23482 | 23488 | - | five_prime_utr | coding_transcript | ||
5543325 | 5543331 | 23482 | 23488 | - | five_prime_utr | coding_transcript | ||
5543325 | 5543331 | 23482 | 23488 | - | five_prime_utr | coding_transcript | ||
5542661 | 5543324 | 23489 | 24152 | - | intron | coding_transcript | ||
5542864 | 5543324 | 23489 | 23949 | - | intron | coding_transcript | ||
5543273 | 5543324 | 23489 | 23540 | - | intron | coding_transcript | ||
5542659 | 5543272 | 23541 | 24154 | - | exon | coding_transcript | ||
5542659 | 5543272 | 23541 | 24154 | - | five_prime_utr | coding_transcript | ||
5542659 | 5542863 | 23950 | 24154 | - | exon | coding_transcript | ||
5542659 | 5542863 | 23950 | 24154 | - | five_prime_utr | coding_transcript | ||
5542544 | 5542660 | 24153 | 24269 | - | exon | coding_transcript | ||
5542544 | 5542660 | 24153 | 24269 | - | five_prime_utr | coding_transcript | ||
5539326 | 5542310 | 24503 | 27487 | + | gene | Hel25E | coding_transcript | |
5536850 | 5539169 | 27644 | 29963 | + | gene | CG14015 | coding_transcript | |
5525905 | 5537108 | 29705 | 40908 | - | gene | Cap-D3 | coding_transcript | |
5535861 | 5536758 | 30055 | 30952 | + | gene | tomb | coding_transcript | |
5530620 | 5532195 | 34618 | 36193 | + | gene | CG7277 | coding_transcript | |
5528087 | 5530682 | 36131 | 38726 | - | gene | CG31915 | coding_transcript | |
5526962 | 5527854 | 38959 | 39851 | - | gene | CG31648 | coding_transcript | |
5524139 | 5525809 | 41004 | 42674 | - | gene | CG6907 | coding_transcript | |
5521281 | 5523877 | 42936 | 45532 | + | gene | CG7371 | coding_transcript | |
5520235 | 5521382 | 45431 | 46578 | - | gene | cl | coding_transcript | |
5518893 | 5519889 | 46924 | 47920 | + | gene | CG7382 | coding_transcript | |
5517823 | 5518949 | 47864 | 48990 | - | gene | CG14020 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Lam[20245]::S000169_fly_pretag_fwd
ACCACCAGCAGGGCGATCCTCAGCAGTCAAACGAGAAGTGCGCCATTATGgaagtgcataccaatcaggacccgc
|
Fasta |
Lam[20245]::S000169_fly_pretag_rev
GTCTTGTTCAGCAAAGAGGAAAGAGTTGTGTTGTGCTGCGTTTGATTTTActtgtcgtcgtcatccttgtagtca
|
Fasta |