Clone: 13996837788417626 G06
Tagged gene: CG4839
Identifier: FBgn0032187
Clone | FlyFos029470(pRedFlp-Hgr)(CG4839[16947]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
10144850 | 10155510 | 16651 | 28373 | - | gene | CG4839 | coding_transcript | |
10144850 | 10155510 | 16651 | 28373 | - | mrna | FBtr0079943 | coding_transcript | |
10146859 | 10155510 | 16651 | 26364 | - | mrna | FBtr0079944 | coding_transcript | |
10154701 | 10155510 | 16651 | 18522 | - | exon | coding_transcript | ||
10154701 | 10155510 | 16651 | 18522 | - | exon | coding_transcript | ||
10155217 | 10155510 | 16651 | 16944 | - | three_prime_utr | coding_transcript | ||
10155217 | 10155510 | 16651 | 16944 | - | three_prime_utr | coding_transcript | ||
10154701 | 10155216 | 16945 | 18522 | - | cds | coding_transcript | ||
10154701 | 10155216 | 16945 | 18522 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 17021 | 17054 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 17062 | 17133 | - | cds | BLRP | CLC | |
2337 | 2357 | 17134 | 17154 | - | cds | TEV | CLC | |
2313 | 2336 | 17155 | 17178 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 17179 | 17220 | - | cds | V5 | CLC | |
1548 | 2264 | 17227 | 17943 | - | cds | SGFP | CLC | |
1482 | 1541 | 17950 | 18009 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2L | ||||||||
10154486 | 10154700 | 18523 | 18737 | - | intron | coding_transcript | ||
10154486 | 10154700 | 18523 | 18737 | - | intron | coding_transcript | ||
10154254 | 10154485 | 18738 | 18969 | - | exon | coding_transcript | ||
10154254 | 10154485 | 18738 | 18969 | - | cds | coding_transcript | ||
10154254 | 10154485 | 18738 | 18969 | - | exon | coding_transcript | ||
10154254 | 10154485 | 18738 | 18969 | - | cds | coding_transcript | ||
10154183 | 10154253 | 18970 | 19040 | - | intron | coding_transcript | ||
10154183 | 10154253 | 18970 | 19040 | - | intron | coding_transcript | ||
10153862 | 10154182 | 19041 | 19361 | - | exon | coding_transcript | ||
10153862 | 10154182 | 19041 | 19361 | - | cds | coding_transcript | ||
10153862 | 10154182 | 19041 | 19361 | - | exon | coding_transcript | ||
10153862 | 10154182 | 19041 | 19361 | - | cds | coding_transcript | ||
10153800 | 10153861 | 19362 | 19423 | - | intron | coding_transcript | ||
10153800 | 10153861 | 19362 | 19423 | - | intron | coding_transcript | ||
10153561 | 10153799 | 19424 | 19662 | - | exon | coding_transcript | ||
10153561 | 10153799 | 19424 | 19662 | - | cds | coding_transcript | ||
10153561 | 10153799 | 19424 | 19662 | - | exon | coding_transcript | ||
10153561 | 10153799 | 19424 | 19662 | - | cds | coding_transcript | ||
10153493 | 10153560 | 19663 | 19730 | - | intron | coding_transcript | ||
10153493 | 10153560 | 19663 | 19730 | - | intron | coding_transcript | ||
10153323 | 10153492 | 19731 | 19900 | - | exon | coding_transcript | ||
10153323 | 10153492 | 19731 | 19900 | - | cds | coding_transcript | ||
10153323 | 10153492 | 19731 | 19900 | - | exon | coding_transcript | ||
10153323 | 10153492 | 19731 | 19900 | - | cds | coding_transcript | ||
10153236 | 10153322 | 19901 | 19987 | - | intron | coding_transcript | ||
10153236 | 10153322 | 19901 | 19987 | - | intron | coding_transcript | ||
10152952 | 10153235 | 19988 | 20271 | - | exon | coding_transcript | ||
10152952 | 10153235 | 19988 | 20271 | - | cds | coding_transcript | ||
10152952 | 10153235 | 19988 | 20271 | - | exon | coding_transcript | ||
10152952 | 10153235 | 19988 | 20271 | - | cds | coding_transcript | ||
10152846 | 10152951 | 20272 | 20377 | - | intron | coding_transcript | ||
10152846 | 10152951 | 20272 | 20377 | - | intron | coding_transcript | ||
10152697 | 10152845 | 20378 | 20526 | - | exon | coding_transcript | ||
10152697 | 10152845 | 20378 | 20526 | - | cds | coding_transcript | ||
10152697 | 10152845 | 20378 | 20526 | - | exon | coding_transcript | ||
10152697 | 10152845 | 20378 | 20526 | - | cds | coding_transcript | ||
10151656 | 10152696 | 20527 | 21567 | - | intron | coding_transcript | ||
10151656 | 10152696 | 20527 | 21567 | - | intron | coding_transcript | ||
10150732 | 10151655 | 21568 | 22491 | - | exon | coding_transcript | ||
10150732 | 10151655 | 21568 | 22491 | - | cds | coding_transcript | ||
10150732 | 10151655 | 21568 | 22491 | - | exon | coding_transcript | ||
10150732 | 10151655 | 21568 | 22491 | - | cds | coding_transcript | ||
10150410 | 10150731 | 22492 | 22813 | - | intron | coding_transcript | ||
10150410 | 10150731 | 22492 | 22813 | - | intron | coding_transcript | ||
10150338 | 10150409 | 22814 | 22885 | - | exon | coding_transcript | ||
10150338 | 10150409 | 22814 | 22885 | - | cds | coding_transcript | ||
10150338 | 10150409 | 22814 | 22885 | - | exon | coding_transcript | ||
10150338 | 10150409 | 22814 | 22885 | - | cds | coding_transcript | ||
10147190 | 10150337 | 22886 | 26033 | - | intron | coding_transcript | ||
10147190 | 10150337 | 22886 | 26033 | - | intron | coding_transcript | ||
10146852 | 10147189 | 26034 | 26371 | - | exon | coding_transcript | ||
10146859 | 10147189 | 26034 | 26364 | - | exon | coding_transcript | ||
10147085 | 10147189 | 26034 | 26138 | - | cds | coding_transcript | ||
10147085 | 10147189 | 26034 | 26138 | - | cds | coding_transcript | ||
10146852 | 10147084 | 26139 | 26371 | - | five_prime_utr | coding_transcript | ||
10146859 | 10147084 | 26139 | 26364 | - | five_prime_utr | coding_transcript | ||
10145219 | 10146851 | 26372 | 28004 | - | intron | coding_transcript | ||
10144850 | 10145218 | 28005 | 28373 | - | exon | coding_transcript | ||
10144850 | 10145218 | 28005 | 28373 | - | five_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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CG4839[16947]::S000169_fly_pretag_fwd
AGAACGACTATGAGCCACCGGAGGAACTGAGCGGATGGGATAAAGACTTTgaagtgcataccaatcaggacccgc
|
Fasta |
CG4839[16947]::S000169_fly_pretag_rev
ACTAACTAATATCCGAAACTTTAGAAAATGCACTTCTCTTGAAGCCTTTActtgtcgtcgtcatccttgtagtca
|
Fasta |