Clone: 13996837788417626 E06

Tagged gene: Mtch
Identifier: FBgn0027786

Clone FlyFos029469(pRedFlp-Hgr)(Mtch[19958]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
176306 178629 10269 12592 - gene Vdup1 coding_transcript
180294 182535 14257 16498 + gene CG13875 coding_transcript
182522 184422 16485 18385 - gene Mkp coding_transcript
182522 184422 16485 18385 - gene CG34140 coding_transcript
184604 186314 18567 21339 + gene Mtch coding_transcript
184604 186314 18567 21339 + mrna FBtr0072477 coding_transcript
184604 186314 18567 21339 + mrna FBtr0072479 coding_transcript
184604 186314 18567 21339 + mrna FBtr0305545 coding_transcript
184604 186314 18567 21339 + mrna FBtr0305546 coding_transcript
184604 184681 18567 18644 + exon coding_transcript
184604 184681 18567 18644 + five_prime_utr coding_transcript
184604 184681 18567 18644 + exon coding_transcript
184604 184681 18567 18644 + five_prime_utr coding_transcript
184604 184669 18567 18632 + exon coding_transcript
184604 184669 18567 18632 + five_prime_utr coding_transcript
184604 184669 18567 18632 + exon coding_transcript
184604 184669 18567 18632 + five_prime_utr coding_transcript
184614 186314 18577 21339 + mrna FBtr0305544 coding_transcript
184614 184662 18577 18625 + exon coding_transcript
184614 184662 18577 18625 + five_prime_utr coding_transcript
184632 186312 18595 21337 + mrna FBtr0305543 coding_transcript
184632 186296 18595 21321 + mrna FBtr0072478 coding_transcript
184632 185074 18595 19037 + exon coding_transcript
184632 185074 18595 19037 + exon coding_transcript
184632 184863 18595 18826 + five_prime_utr coding_transcript
184632 184863 18595 18826 + five_prime_utr coding_transcript
184663 184777 18626 18740 + intron coding_transcript
184670 184777 18633 18740 + intron coding_transcript
184670 184774 18633 18737 + intron coding_transcript
184682 184777 18645 18740 + intron coding_transcript
184682 184774 18645 18737 + intron coding_transcript
184775 185074 18738 19037 + exon coding_transcript
184775 185074 18738 19037 + exon coding_transcript
184775 184863 18738 18826 + five_prime_utr coding_transcript
184775 184863 18738 18826 + five_prime_utr coding_transcript
184778 185074 18741 19037 + exon coding_transcript
184778 185074 18741 19037 + exon coding_transcript
184778 185074 18741 19037 + exon coding_transcript
184778 184863 18741 18826 + five_prime_utr coding_transcript
184778 184863 18741 18826 + five_prime_utr coding_transcript
184778 184863 18741 18826 + five_prime_utr coding_transcript
184864 185074 18827 19037 + cds coding_transcript
184864 185074 18827 19037 + cds coding_transcript
184864 185074 18827 19037 + cds coding_transcript
184864 185074 18827 19037 + cds coding_transcript
184864 185074 18827 19037 + cds coding_transcript
184864 185074 18827 19037 + cds coding_transcript
184864 185074 18827 19037 + cds coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185075 185134 19038 19097 + intron coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185135 185303 19098 19266 + exon coding_transcript
185135 185303 19098 19266 + cds coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185304 185366 19267 19329 + intron coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185367 185864 19330 19827 + exon coding_transcript
185367 185864 19330 19827 + cds coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185865 185925 19828 19888 + intron coding_transcript
185926 186314 19889 21339 + exon coding_transcript
185926 186314 19889 21339 + exon coding_transcript
185926 186314 19889 21339 + exon coding_transcript
185926 186314 19889 21339 + exon coding_transcript
185926 186314 19889 21339 + exon coding_transcript
185926 186312 19889 21337 + exon coding_transcript
185926 186296 19889 21321 + exon coding_transcript
185926 185998 19889 21023 + cds coding_transcript
185926 185998 19889 21023 + cds coding_transcript
185926 185998 19889 21023 + cds coding_transcript
185926 185998 19889 21023 + cds coding_transcript
185926 185998 19889 21023 + cds coding_transcript
185926 185998 19889 21023 + cds coding_transcript
185926 185998 19889 21023 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 19959 20018 + cds 2xTY1 CLC
1548 2264 20025 20741 + cds SGFP CLC
2271 2312 20748 20789 + cds V5 CLC
2313 2336 20790 20813 + cds Precision cut site CLC
2337 2357 20814 20834 + cds TEV CLC
2358 2429 20835 20906 + cds BLRP CLC
3813 3846 20914 20947 + misc_recomb FRT CLC
dmel-5.43-3L
185999 186314 21024 21339 + three_prime_utr coding_transcript
185999 186314 21024 21339 + three_prime_utr coding_transcript
185999 186314 21024 21339 + three_prime_utr coding_transcript
185999 186314 21024 21339 + three_prime_utr coding_transcript
185999 186314 21024 21339 + three_prime_utr coding_transcript
185999 186312 21024 21337 + three_prime_utr coding_transcript
185999 186296 21024 21321 + three_prime_utr coding_transcript
187815 199762 22840 34787 - gene rno coding_transcript
200180 202152 35205 37177 + gene mri coding_transcript
202098 205844 37123 40869 - gene Gyk coding_transcript
203699 205309 38724 40334 + gene NitFhit coding_transcript
206134 207527 41159 42552 + gene CG13876 coding_transcript
207887 211462 42912 46487 - gene CG7028 coding_transcript
211636 212687 46661 47712 - gene thoc7 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Mtch[19958]::S000169_fly_pretag_fwd
CAGTAATAGCCACCTCATTCGCGCCCTTGCCTAAGCTGGCGCGTTACCAGgaagtgcataccaatcaggacccgc
 fasta Fasta
Mtch[19958]::S000169_fly_pretag_rev
TGTCATACCGGAGCCCGTCCGTGGTCGTCCAGCCTCGTTGTTGACGGCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta