Clone: 13996837788417626 D06
Tagged gene: rno
Identifier: FBgn0035106
Clone | FlyFos029469(pRedFlp-Hgr)(rno[22514]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
176306 | 178629 | 10269 | 12592 | - | gene | Vdup1 | coding_transcript | |
180294 | 182535 | 14257 | 16498 | + | gene | CG13875 | coding_transcript | |
182522 | 184422 | 16485 | 18385 | - | gene | Mkp | coding_transcript | |
182522 | 184422 | 16485 | 18385 | - | gene | CG34140 | coding_transcript | |
184604 | 186314 | 18567 | 20277 | + | gene | Mtch | coding_transcript | |
187815 | 199762 | 21778 | 34787 | - | gene | rno | coding_transcript | |
187815 | 199762 | 21778 | 34787 | - | mrna | FBtr0072532 | coding_transcript | |
187815 | 199762 | 21778 | 34787 | - | mrna | FBtr0305549 | coding_transcript | |
187815 | 196603 | 21778 | 31628 | - | exon | coding_transcript | ||
187815 | 196603 | 21778 | 31628 | - | exon | coding_transcript | ||
187815 | 188548 | 21778 | 22511 | - | three_prime_utr | coding_transcript | ||
187815 | 188548 | 21778 | 22511 | - | three_prime_utr | coding_transcript | ||
187986 | 199762 | 21949 | 34787 | - | mrna | FBtr0305548 | coding_transcript | |
187986 | 196603 | 21949 | 31628 | - | exon | coding_transcript | ||
187986 | 188548 | 21949 | 22511 | - | three_prime_utr | coding_transcript | ||
188549 | 196603 | 22512 | 31628 | - | cds | coding_transcript | ||
188549 | 196603 | 22512 | 31628 | - | cds | coding_transcript | ||
188549 | 196603 | 22512 | 31628 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 22588 | 22621 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 22629 | 22700 | - | cds | BLRP | CLC | |
2337 | 2357 | 22701 | 22721 | - | cds | TEV | CLC | |
2313 | 2336 | 22722 | 22745 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 22746 | 22787 | - | cds | V5 | CLC | |
1548 | 2264 | 22794 | 23510 | - | cds | SGFP | CLC | |
1482 | 1541 | 23517 | 23576 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3L | ||||||||
196604 | 196672 | 31629 | 31697 | - | intron | coding_transcript | ||
196604 | 196672 | 31629 | 31697 | - | intron | coding_transcript | ||
196604 | 196672 | 31629 | 31697 | - | intron | coding_transcript | ||
196673 | 197289 | 31698 | 32314 | - | exon | coding_transcript | ||
196673 | 197289 | 31698 | 32314 | - | cds | coding_transcript | ||
196673 | 197289 | 31698 | 32314 | - | exon | coding_transcript | ||
196673 | 197289 | 31698 | 32314 | - | cds | coding_transcript | ||
196673 | 197289 | 31698 | 32314 | - | exon | coding_transcript | ||
196673 | 197289 | 31698 | 32314 | - | cds | coding_transcript | ||
197290 | 197347 | 32315 | 32372 | - | intron | coding_transcript | ||
197290 | 197347 | 32315 | 32372 | - | intron | coding_transcript | ||
197290 | 197347 | 32315 | 32372 | - | intron | coding_transcript | ||
197348 | 197537 | 32373 | 32562 | - | exon | coding_transcript | ||
197348 | 197537 | 32373 | 32562 | - | cds | coding_transcript | ||
197348 | 197537 | 32373 | 32562 | - | exon | coding_transcript | ||
197348 | 197537 | 32373 | 32562 | - | cds | coding_transcript | ||
197348 | 197537 | 32373 | 32562 | - | exon | coding_transcript | ||
197348 | 197537 | 32373 | 32562 | - | cds | coding_transcript | ||
197538 | 197589 | 32563 | 32614 | - | intron | coding_transcript | ||
197538 | 197589 | 32563 | 32614 | - | intron | coding_transcript | ||
197538 | 197589 | 32563 | 32614 | - | intron | coding_transcript | ||
197590 | 197806 | 32615 | 32831 | - | exon | coding_transcript | ||
197590 | 197806 | 32615 | 32831 | - | cds | coding_transcript | ||
197590 | 197806 | 32615 | 32831 | - | exon | coding_transcript | ||
197590 | 197806 | 32615 | 32831 | - | cds | coding_transcript | ||
197590 | 197806 | 32615 | 32831 | - | exon | coding_transcript | ||
197590 | 197806 | 32615 | 32831 | - | cds | coding_transcript | ||
197807 | 197879 | 32832 | 32904 | - | intron | coding_transcript | ||
197807 | 197879 | 32832 | 32904 | - | intron | coding_transcript | ||
197807 | 197879 | 32832 | 32904 | - | intron | coding_transcript | ||
197880 | 198074 | 32905 | 33099 | - | exon | coding_transcript | ||
197880 | 198074 | 32905 | 33099 | - | cds | coding_transcript | ||
197880 | 198074 | 32905 | 33099 | - | exon | coding_transcript | ||
197880 | 198074 | 32905 | 33099 | - | cds | coding_transcript | ||
197880 | 198074 | 32905 | 33099 | - | exon | coding_transcript | ||
197880 | 198074 | 32905 | 33099 | - | cds | coding_transcript | ||
198075 | 198135 | 33100 | 33160 | - | intron | coding_transcript | ||
198075 | 198135 | 33100 | 33160 | - | intron | coding_transcript | ||
198075 | 198135 | 33100 | 33160 | - | intron | coding_transcript | ||
198136 | 198689 | 33161 | 33714 | - | exon | coding_transcript | ||
198136 | 198689 | 33161 | 33714 | - | exon | coding_transcript | ||
198136 | 198689 | 33161 | 33714 | - | exon | coding_transcript | ||
198136 | 198587 | 33161 | 33612 | - | cds | coding_transcript | ||
198136 | 198587 | 33161 | 33612 | - | cds | coding_transcript | ||
198136 | 198587 | 33161 | 33612 | - | cds | coding_transcript | ||
198588 | 198689 | 33613 | 33714 | - | five_prime_utr | coding_transcript | ||
198588 | 198689 | 33613 | 33714 | - | five_prime_utr | coding_transcript | ||
198588 | 198689 | 33613 | 33714 | - | five_prime_utr | coding_transcript | ||
198690 | 198761 | 33715 | 33786 | - | intron | coding_transcript | ||
198690 | 198761 | 33715 | 33786 | - | intron | coding_transcript | ||
198690 | 198761 | 33715 | 33786 | - | intron | coding_transcript | ||
198762 | 199087 | 33787 | 34112 | - | exon | coding_transcript | ||
198762 | 199087 | 33787 | 34112 | - | five_prime_utr | coding_transcript | ||
198762 | 199087 | 33787 | 34112 | - | exon | coding_transcript | ||
198762 | 199087 | 33787 | 34112 | - | five_prime_utr | coding_transcript | ||
198762 | 199087 | 33787 | 34112 | - | exon | coding_transcript | ||
198762 | 199087 | 33787 | 34112 | - | five_prime_utr | coding_transcript | ||
199088 | 199678 | 34113 | 34703 | - | intron | coding_transcript | ||
199088 | 199626 | 34113 | 34651 | - | intron | coding_transcript | ||
199088 | 199462 | 34113 | 34487 | - | intron | coding_transcript | ||
199463 | 199762 | 34488 | 34787 | - | exon | coding_transcript | ||
199463 | 199762 | 34488 | 34787 | - | five_prime_utr | coding_transcript | ||
199627 | 199762 | 34652 | 34787 | - | exon | coding_transcript | ||
199627 | 199762 | 34652 | 34787 | - | five_prime_utr | coding_transcript | ||
199679 | 199762 | 34704 | 34787 | - | exon | coding_transcript | ||
199679 | 199762 | 34704 | 34787 | - | five_prime_utr | coding_transcript | ||
200180 | 202152 | 35205 | 37177 | + | gene | mri | coding_transcript | |
202098 | 205844 | 37123 | 40869 | - | gene | Gyk | coding_transcript | |
203699 | 205309 | 38724 | 40334 | + | gene | NitFhit | coding_transcript | |
206134 | 207527 | 41159 | 42552 | + | gene | CG13876 | coding_transcript | |
207887 | 211462 | 42912 | 46487 | - | gene | CG7028 | coding_transcript | |
211636 | 212687 | 46661 | 47712 | - | gene | thoc7 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
rno[22514]::S000169_fly_pretag_rev
AAGTTACAGGATACGCTTACATGCGACGTTTTCGCGTTCTCCGATTATCActtgtcgtcgtcatccttgtagtca
|
Fasta |
rno[22514]::S000169_fly_pretag_fwd
CCAGCGGGGAAGGCGGCTTACTTCCATTGAAAAAAGACTGTGAGGTTAGAgaagtgcataccaatcaggacccgc
|
Fasta |