Clone: 13996837788417626 D06

Tagged gene: rno
Identifier: FBgn0035106

Clone FlyFos029469(pRedFlp-Hgr)(rno[22514]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
176306 178629 10269 12592 - gene Vdup1 coding_transcript
180294 182535 14257 16498 + gene CG13875 coding_transcript
182522 184422 16485 18385 - gene Mkp coding_transcript
182522 184422 16485 18385 - gene CG34140 coding_transcript
184604 186314 18567 20277 + gene Mtch coding_transcript
187815 199762 21778 34787 - gene rno coding_transcript
187815 199762 21778 34787 - mrna FBtr0072532 coding_transcript
187815 199762 21778 34787 - mrna FBtr0305549 coding_transcript
187815 196603 21778 31628 - exon coding_transcript
187815 196603 21778 31628 - exon coding_transcript
187815 188548 21778 22511 - three_prime_utr coding_transcript
187815 188548 21778 22511 - three_prime_utr coding_transcript
187986 199762 21949 34787 - mrna FBtr0305548 coding_transcript
187986 196603 21949 31628 - exon coding_transcript
187986 188548 21949 22511 - three_prime_utr coding_transcript
188549 196603 22512 31628 - cds coding_transcript
188549 196603 22512 31628 - cds coding_transcript
188549 196603 22512 31628 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 22588 22621 - misc_recomb FRT CLC
2358 2429 22629 22700 - cds BLRP CLC
2337 2357 22701 22721 - cds TEV CLC
2313 2336 22722 22745 - cds Precision cut site CLC
2271 2312 22746 22787 - cds V5 CLC
1548 2264 22794 23510 - cds SGFP CLC
1482 1541 23517 23576 - cds 2xTY1 CLC
dmel-5.43-3L
196604 196672 31629 31697 - intron coding_transcript
196604 196672 31629 31697 - intron coding_transcript
196604 196672 31629 31697 - intron coding_transcript
196673 197289 31698 32314 - exon coding_transcript
196673 197289 31698 32314 - cds coding_transcript
196673 197289 31698 32314 - exon coding_transcript
196673 197289 31698 32314 - cds coding_transcript
196673 197289 31698 32314 - exon coding_transcript
196673 197289 31698 32314 - cds coding_transcript
197290 197347 32315 32372 - intron coding_transcript
197290 197347 32315 32372 - intron coding_transcript
197290 197347 32315 32372 - intron coding_transcript
197348 197537 32373 32562 - exon coding_transcript
197348 197537 32373 32562 - cds coding_transcript
197348 197537 32373 32562 - exon coding_transcript
197348 197537 32373 32562 - cds coding_transcript
197348 197537 32373 32562 - exon coding_transcript
197348 197537 32373 32562 - cds coding_transcript
197538 197589 32563 32614 - intron coding_transcript
197538 197589 32563 32614 - intron coding_transcript
197538 197589 32563 32614 - intron coding_transcript
197590 197806 32615 32831 - exon coding_transcript
197590 197806 32615 32831 - cds coding_transcript
197590 197806 32615 32831 - exon coding_transcript
197590 197806 32615 32831 - cds coding_transcript
197590 197806 32615 32831 - exon coding_transcript
197590 197806 32615 32831 - cds coding_transcript
197807 197879 32832 32904 - intron coding_transcript
197807 197879 32832 32904 - intron coding_transcript
197807 197879 32832 32904 - intron coding_transcript
197880 198074 32905 33099 - exon coding_transcript
197880 198074 32905 33099 - cds coding_transcript
197880 198074 32905 33099 - exon coding_transcript
197880 198074 32905 33099 - cds coding_transcript
197880 198074 32905 33099 - exon coding_transcript
197880 198074 32905 33099 - cds coding_transcript
198075 198135 33100 33160 - intron coding_transcript
198075 198135 33100 33160 - intron coding_transcript
198075 198135 33100 33160 - intron coding_transcript
198136 198689 33161 33714 - exon coding_transcript
198136 198689 33161 33714 - exon coding_transcript
198136 198689 33161 33714 - exon coding_transcript
198136 198587 33161 33612 - cds coding_transcript
198136 198587 33161 33612 - cds coding_transcript
198136 198587 33161 33612 - cds coding_transcript
198588 198689 33613 33714 - five_prime_utr coding_transcript
198588 198689 33613 33714 - five_prime_utr coding_transcript
198588 198689 33613 33714 - five_prime_utr coding_transcript
198690 198761 33715 33786 - intron coding_transcript
198690 198761 33715 33786 - intron coding_transcript
198690 198761 33715 33786 - intron coding_transcript
198762 199087 33787 34112 - exon coding_transcript
198762 199087 33787 34112 - five_prime_utr coding_transcript
198762 199087 33787 34112 - exon coding_transcript
198762 199087 33787 34112 - five_prime_utr coding_transcript
198762 199087 33787 34112 - exon coding_transcript
198762 199087 33787 34112 - five_prime_utr coding_transcript
199088 199678 34113 34703 - intron coding_transcript
199088 199626 34113 34651 - intron coding_transcript
199088 199462 34113 34487 - intron coding_transcript
199463 199762 34488 34787 - exon coding_transcript
199463 199762 34488 34787 - five_prime_utr coding_transcript
199627 199762 34652 34787 - exon coding_transcript
199627 199762 34652 34787 - five_prime_utr coding_transcript
199679 199762 34704 34787 - exon coding_transcript
199679 199762 34704 34787 - five_prime_utr coding_transcript
200180 202152 35205 37177 + gene mri coding_transcript
202098 205844 37123 40869 - gene Gyk coding_transcript
203699 205309 38724 40334 + gene NitFhit coding_transcript
206134 207527 41159 42552 + gene CG13876 coding_transcript
207887 211462 42912 46487 - gene CG7028 coding_transcript
211636 212687 46661 47712 - gene thoc7 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
rno[22514]::S000169_fly_pretag_rev
AAGTTACAGGATACGCTTACATGCGACGTTTTCGCGTTCTCCGATTATCActtgtcgtcgtcatccttgtagtca
fasta Fasta
rno[22514]::S000169_fly_pretag_fwd
CCAGCGGGGAAGGCGGCTTACTTCCATTGAAAAAAGACTGTGAGGTTAGAgaagtgcataccaatcaggacccgc
fasta Fasta