Clone: 13996837788417626 G05

Tagged gene: CCHa2
Identifier: FBgn0038147

Clone FlyFos029462(pRedFlp-Hgr)(CCHa2[44292]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
9245995 9248862 10828 13695 - gene Ir87a coding_transcript
9235264 9241006 18684 24426 + gene yellow-e coding_transcript
9230831 9232689 27001 28859 + gene yellow-e2 coding_transcript
9229145 9230590 29100 30545 + gene yellow-e3 coding_transcript
9228281 9228771 30919 31409 + gene CG33977 coding_transcript
9224248 9227580 32110 35442 + gene CG9796 coding_transcript
9223557 9224305 35385 36133 - gene CG14377 coding_transcript
9222416 9222855 36835 37274 + gene CG14374 coding_transcript
9214781 9220912 38778 45971 + gene CCHa2 coding_transcript
9214781 9220912 38778 45971 + mrna FBtr0082762 coding_transcript
9220783 9220912 38778 38907 + exon coding_transcript
9220783 9220912 38778 38907 + five_prime_utr coding_transcript
9217668 9220782 38908 42022 + intron coding_transcript
9214781 9218803 40887 45971 + mrna FBtr0303262 coding_transcript
9214781 9218803 40887 45971 + mrna FBtr0303263 coding_transcript
9218512 9218803 40887 41178 + exon coding_transcript
9218512 9218803 40887 41178 + five_prime_utr coding_transcript
9218553 9218803 40887 41137 + exon coding_transcript
9218553 9218803 40887 41137 + five_prime_utr coding_transcript
9217668 9218552 41138 42022 + intron coding_transcript
9217668 9218511 41179 42022 + intron coding_transcript
9217587 9217667 42023 42103 + exon coding_transcript
9217587 9217667 42023 42103 + exon coding_transcript
9217587 9217667 42023 42103 + exon coding_transcript
9217663 9217667 42023 42027 + five_prime_utr coding_transcript
9217663 9217667 42023 42027 + five_prime_utr coding_transcript
9217663 9217667 42023 42027 + five_prime_utr coding_transcript
9217587 9217662 42028 42103 + cds coding_transcript
9217587 9217662 42028 42103 + cds coding_transcript
9217587 9217662 42028 42103 + cds coding_transcript
9216018 9217586 42104 43672 + intron coding_transcript
9216018 9217586 42104 43672 + intron coding_transcript
9216018 9217586 42104 43672 + intron coding_transcript
9215770 9216017 43673 43920 + exon coding_transcript
9215770 9216017 43673 43920 + cds coding_transcript
9215770 9216017 43673 43920 + exon coding_transcript
9215770 9216017 43673 43920 + cds coding_transcript
9215770 9216017 43673 43920 + exon coding_transcript
9215770 9216017 43673 43920 + cds coding_transcript
9215482 9215769 43921 44208 + intron coding_transcript
9215482 9215769 43921 44208 + intron coding_transcript
9215482 9215769 43921 44208 + intron coding_transcript
9214781 9215481 44209 45971 + exon coding_transcript
9214781 9215481 44209 45971 + exon coding_transcript
9214781 9215481 44209 45971 + exon coding_transcript
9215395 9215481 44209 45357 + cds coding_transcript
9215395 9215481 44209 45357 + cds coding_transcript
9215395 9215481 44209 45357 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 44293 44352 + cds 2xTY1 CLC
1548 2264 44359 45075 + cds SGFP CLC
2271 2312 45082 45123 + cds V5 CLC
2313 2336 45124 45147 + cds Precision cut site CLC
2337 2357 45148 45168 + cds TEV CLC
2358 2429 45169 45240 + cds BLRP CLC
3813 3846 45248 45281 + misc_recomb FRT CLC
dmel-5.43-3R
9214781 9215394 45358 45971 + three_prime_utr coding_transcript
9214781 9215394 45358 45971 + three_prime_utr coding_transcript
9214781 9215394 45358 45971 + three_prime_utr coding_transcript
9211370 9214436 46316 49382 + gene CG9799 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CCHa2[44292]::S000169_fly_pretag_rev
TTTTAATGTACGTTGTGGATATTTCTGTATTGATAACTTTTCCGGCCTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CCHa2[44292]::S000169_fly_pretag_fwd
GTGAACTTGATTATCCCTTGGCCAATTCCGCCGAATTGAATGGCGTGAACgaagtgcataccaatcaggacccgc
fasta Fasta