Clone: 13996837788417626 G05
Tagged gene: CCHa2
Identifier: FBgn0038147
Clone | FlyFos029462(pRedFlp-Hgr)(CCHa2[44292]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
9245995 | 9248862 | 10828 | 13695 | - | gene | Ir87a | coding_transcript | |
9235264 | 9241006 | 18684 | 24426 | + | gene | yellow-e | coding_transcript | |
9230831 | 9232689 | 27001 | 28859 | + | gene | yellow-e2 | coding_transcript | |
9229145 | 9230590 | 29100 | 30545 | + | gene | yellow-e3 | coding_transcript | |
9228281 | 9228771 | 30919 | 31409 | + | gene | CG33977 | coding_transcript | |
9224248 | 9227580 | 32110 | 35442 | + | gene | CG9796 | coding_transcript | |
9223557 | 9224305 | 35385 | 36133 | - | gene | CG14377 | coding_transcript | |
9222416 | 9222855 | 36835 | 37274 | + | gene | CG14374 | coding_transcript | |
9214781 | 9220912 | 38778 | 45971 | + | gene | CCHa2 | coding_transcript | |
9214781 | 9220912 | 38778 | 45971 | + | mrna | FBtr0082762 | coding_transcript | |
9220783 | 9220912 | 38778 | 38907 | + | exon | coding_transcript | ||
9220783 | 9220912 | 38778 | 38907 | + | five_prime_utr | coding_transcript | ||
9217668 | 9220782 | 38908 | 42022 | + | intron | coding_transcript | ||
9214781 | 9218803 | 40887 | 45971 | + | mrna | FBtr0303262 | coding_transcript | |
9214781 | 9218803 | 40887 | 45971 | + | mrna | FBtr0303263 | coding_transcript | |
9218512 | 9218803 | 40887 | 41178 | + | exon | coding_transcript | ||
9218512 | 9218803 | 40887 | 41178 | + | five_prime_utr | coding_transcript | ||
9218553 | 9218803 | 40887 | 41137 | + | exon | coding_transcript | ||
9218553 | 9218803 | 40887 | 41137 | + | five_prime_utr | coding_transcript | ||
9217668 | 9218552 | 41138 | 42022 | + | intron | coding_transcript | ||
9217668 | 9218511 | 41179 | 42022 | + | intron | coding_transcript | ||
9217587 | 9217667 | 42023 | 42103 | + | exon | coding_transcript | ||
9217587 | 9217667 | 42023 | 42103 | + | exon | coding_transcript | ||
9217587 | 9217667 | 42023 | 42103 | + | exon | coding_transcript | ||
9217663 | 9217667 | 42023 | 42027 | + | five_prime_utr | coding_transcript | ||
9217663 | 9217667 | 42023 | 42027 | + | five_prime_utr | coding_transcript | ||
9217663 | 9217667 | 42023 | 42027 | + | five_prime_utr | coding_transcript | ||
9217587 | 9217662 | 42028 | 42103 | + | cds | coding_transcript | ||
9217587 | 9217662 | 42028 | 42103 | + | cds | coding_transcript | ||
9217587 | 9217662 | 42028 | 42103 | + | cds | coding_transcript | ||
9216018 | 9217586 | 42104 | 43672 | + | intron | coding_transcript | ||
9216018 | 9217586 | 42104 | 43672 | + | intron | coding_transcript | ||
9216018 | 9217586 | 42104 | 43672 | + | intron | coding_transcript | ||
9215770 | 9216017 | 43673 | 43920 | + | exon | coding_transcript | ||
9215770 | 9216017 | 43673 | 43920 | + | cds | coding_transcript | ||
9215770 | 9216017 | 43673 | 43920 | + | exon | coding_transcript | ||
9215770 | 9216017 | 43673 | 43920 | + | cds | coding_transcript | ||
9215770 | 9216017 | 43673 | 43920 | + | exon | coding_transcript | ||
9215770 | 9216017 | 43673 | 43920 | + | cds | coding_transcript | ||
9215482 | 9215769 | 43921 | 44208 | + | intron | coding_transcript | ||
9215482 | 9215769 | 43921 | 44208 | + | intron | coding_transcript | ||
9215482 | 9215769 | 43921 | 44208 | + | intron | coding_transcript | ||
9214781 | 9215481 | 44209 | 45971 | + | exon | coding_transcript | ||
9214781 | 9215481 | 44209 | 45971 | + | exon | coding_transcript | ||
9214781 | 9215481 | 44209 | 45971 | + | exon | coding_transcript | ||
9215395 | 9215481 | 44209 | 45357 | + | cds | coding_transcript | ||
9215395 | 9215481 | 44209 | 45357 | + | cds | coding_transcript | ||
9215395 | 9215481 | 44209 | 45357 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 44293 | 44352 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 44359 | 45075 | + | cds | SGFP | CLC | |
2271 | 2312 | 45082 | 45123 | + | cds | V5 | CLC | |
2313 | 2336 | 45124 | 45147 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 45148 | 45168 | + | cds | TEV | CLC | |
2358 | 2429 | 45169 | 45240 | + | cds | BLRP | CLC | |
3813 | 3846 | 45248 | 45281 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
9214781 | 9215394 | 45358 | 45971 | + | three_prime_utr | coding_transcript | ||
9214781 | 9215394 | 45358 | 45971 | + | three_prime_utr | coding_transcript | ||
9214781 | 9215394 | 45358 | 45971 | + | three_prime_utr | coding_transcript | ||
9211370 | 9214436 | 46316 | 49382 | + | gene | CG9799 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CCHa2[44292]::S000169_fly_pretag_rev
TTTTAATGTACGTTGTGGATATTTCTGTATTGATAACTTTTCCGGCCTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CCHa2[44292]::S000169_fly_pretag_fwd
GTGAACTTGATTATCCCTTGGCCAATTCCGCCGAATTGAATGGCGTGAACgaagtgcataccaatcaggacccgc
|
Fasta |