Clone: 13996837788417626 F01
Tagged gene: CG12272
Identifier: FBgn0036571
Clone | FlyFos029393(pRedFlp-Hgr)(CG12272[19493]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
16124092 | 16124703 | 13887 | 14498 | + | gene | l(3)72Dh | coding_transcript | |
16122740 | 16124086 | 14504 | 15850 | - | gene | SsRbeta | coding_transcript | |
16119155 | 16121696 | 16894 | 19435 | + | gene | Pgm | coding_transcript | |
16115122 | 16119152 | 19438 | 24530 | - | gene | CG12272 | coding_transcript | |
16115122 | 16119152 | 19438 | 24530 | - | mrna | FBtr0301912 | coding_transcript | |
16115140 | 16119152 | 19438 | 24512 | - | mrna | FBtr0075452 | coding_transcript | |
16118946 | 16119152 | 19438 | 20706 | - | exon | coding_transcript | ||
16118946 | 16119152 | 19438 | 20706 | - | exon | coding_transcript | ||
16119100 | 16119152 | 19438 | 19490 | - | three_prime_utr | coding_transcript | ||
16119100 | 16119152 | 19438 | 19490 | - | three_prime_utr | coding_transcript | ||
16118946 | 16119099 | 19491 | 20706 | - | cds | coding_transcript | ||
16118946 | 16119099 | 19491 | 20706 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 19567 | 19600 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 19608 | 19679 | - | cds | BLRP | CLC | |
2337 | 2357 | 19680 | 19700 | - | cds | TEV | CLC | |
2313 | 2336 | 19701 | 19724 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 19725 | 19766 | - | cds | V5 | CLC | |
1548 | 2264 | 19773 | 20489 | - | cds | SGFP | CLC | |
1482 | 1541 | 20496 | 20555 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3L | ||||||||
16118884 | 16118945 | 20707 | 20768 | - | intron | coding_transcript | ||
16118884 | 16118945 | 20707 | 20768 | - | intron | coding_transcript | ||
16118512 | 16118883 | 20769 | 21140 | - | exon | coding_transcript | ||
16118512 | 16118883 | 20769 | 21140 | - | cds | coding_transcript | ||
16118512 | 16118883 | 20769 | 21140 | - | exon | coding_transcript | ||
16118512 | 16118883 | 20769 | 21140 | - | cds | coding_transcript | ||
16118452 | 16118511 | 21141 | 21200 | - | intron | coding_transcript | ||
16118452 | 16118511 | 21141 | 21200 | - | intron | coding_transcript | ||
16115624 | 16118451 | 21201 | 24028 | - | exon | coding_transcript | ||
16115624 | 16118451 | 21201 | 24028 | - | cds | coding_transcript | ||
16115624 | 16118451 | 21201 | 24028 | - | exon | coding_transcript | ||
16115624 | 16118451 | 21201 | 24028 | - | cds | coding_transcript | ||
16115565 | 16115623 | 24029 | 24087 | - | intron | coding_transcript | ||
16115565 | 16115623 | 24029 | 24087 | - | intron | coding_transcript | ||
16115462 | 16115564 | 24088 | 24190 | - | exon | coding_transcript | ||
16115462 | 16115564 | 24088 | 24190 | - | cds | coding_transcript | ||
16115462 | 16115564 | 24088 | 24190 | - | exon | coding_transcript | ||
16115462 | 16115564 | 24088 | 24190 | - | cds | coding_transcript | ||
16115406 | 16115461 | 24191 | 24246 | - | intron | coding_transcript | ||
16115406 | 16115461 | 24191 | 24246 | - | intron | coding_transcript | ||
16115122 | 16115405 | 24247 | 24530 | - | exon | coding_transcript | ||
16115246 | 16115405 | 24247 | 24406 | - | exon | coding_transcript | ||
16115287 | 16115405 | 24247 | 24365 | - | cds | coding_transcript | ||
16115287 | 16115405 | 24247 | 24365 | - | cds | coding_transcript | ||
16115122 | 16115286 | 24366 | 24530 | - | five_prime_utr | coding_transcript | ||
16115246 | 16115286 | 24366 | 24406 | - | five_prime_utr | coding_transcript | ||
16115194 | 16115245 | 24407 | 24458 | - | intron | coding_transcript | ||
16115140 | 16115193 | 24459 | 24512 | - | exon | coding_transcript | ||
16115140 | 16115193 | 24459 | 24512 | - | five_prime_utr | coding_transcript | ||
16106323 | 16114468 | 25184 | 33329 | - | gene | Taf4 | coding_transcript | |
16099694 | 16105491 | 34161 | 39958 | + | gene | Zn72D | coding_transcript | |
16098952 | 16099528 | 40124 | 40700 | - | gene | CG43295 | coding_transcript | |
16096532 | 16098711 | 40941 | 43120 | + | gene | IntS9 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG12272[19493]::S000169_fly_pretag_fwd
TTCCCAACATAATACTTAGCGAGTACGAGTATTTATCCACACTGCTAAAAgaagtgcataccaatcaggacccgc
|
Fasta |
CG12272[19493]::S000169_fly_pretag_rev
TTTCGGATTTATTAAAGTTTGTGTAGCCCAAACCTGTTGGTTAGTTTTCActtgtcgtcgtcatccttgtagtca
|
Fasta |