Clone: 13996837788417626 F01

Tagged gene: CG12272
Identifier: FBgn0036571

Clone FlyFos029393(pRedFlp-Hgr)(CG12272[19493]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
16124092 16124703 13887 14498 + gene l(3)72Dh coding_transcript
16122740 16124086 14504 15850 - gene SsRbeta coding_transcript
16119155 16121696 16894 19435 + gene Pgm coding_transcript
16115122 16119152 19438 24530 - gene CG12272 coding_transcript
16115122 16119152 19438 24530 - mrna FBtr0301912 coding_transcript
16115140 16119152 19438 24512 - mrna FBtr0075452 coding_transcript
16118946 16119152 19438 20706 - exon coding_transcript
16118946 16119152 19438 20706 - exon coding_transcript
16119100 16119152 19438 19490 - three_prime_utr coding_transcript
16119100 16119152 19438 19490 - three_prime_utr coding_transcript
16118946 16119099 19491 20706 - cds coding_transcript
16118946 16119099 19491 20706 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19567 19600 - misc_recomb FRT CLC
2358 2429 19608 19679 - cds BLRP CLC
2337 2357 19680 19700 - cds TEV CLC
2313 2336 19701 19724 - cds Precision cut site CLC
2271 2312 19725 19766 - cds V5 CLC
1548 2264 19773 20489 - cds SGFP CLC
1482 1541 20496 20555 - cds 2xTY1 CLC
dmel-5.43-3L
16118884 16118945 20707 20768 - intron coding_transcript
16118884 16118945 20707 20768 - intron coding_transcript
16118512 16118883 20769 21140 - exon coding_transcript
16118512 16118883 20769 21140 - cds coding_transcript
16118512 16118883 20769 21140 - exon coding_transcript
16118512 16118883 20769 21140 - cds coding_transcript
16118452 16118511 21141 21200 - intron coding_transcript
16118452 16118511 21141 21200 - intron coding_transcript
16115624 16118451 21201 24028 - exon coding_transcript
16115624 16118451 21201 24028 - cds coding_transcript
16115624 16118451 21201 24028 - exon coding_transcript
16115624 16118451 21201 24028 - cds coding_transcript
16115565 16115623 24029 24087 - intron coding_transcript
16115565 16115623 24029 24087 - intron coding_transcript
16115462 16115564 24088 24190 - exon coding_transcript
16115462 16115564 24088 24190 - cds coding_transcript
16115462 16115564 24088 24190 - exon coding_transcript
16115462 16115564 24088 24190 - cds coding_transcript
16115406 16115461 24191 24246 - intron coding_transcript
16115406 16115461 24191 24246 - intron coding_transcript
16115122 16115405 24247 24530 - exon coding_transcript
16115246 16115405 24247 24406 - exon coding_transcript
16115287 16115405 24247 24365 - cds coding_transcript
16115287 16115405 24247 24365 - cds coding_transcript
16115122 16115286 24366 24530 - five_prime_utr coding_transcript
16115246 16115286 24366 24406 - five_prime_utr coding_transcript
16115194 16115245 24407 24458 - intron coding_transcript
16115140 16115193 24459 24512 - exon coding_transcript
16115140 16115193 24459 24512 - five_prime_utr coding_transcript
16106323 16114468 25184 33329 - gene Taf4 coding_transcript
16099694 16105491 34161 39958 + gene Zn72D coding_transcript
16098952 16099528 40124 40700 - gene CG43295 coding_transcript
16096532 16098711 40941 43120 + gene IntS9 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG12272[19493]::S000169_fly_pretag_fwd
TTCCCAACATAATACTTAGCGAGTACGAGTATTTATCCACACTGCTAAAAgaagtgcataccaatcaggacccgc
fasta Fasta
CG12272[19493]::S000169_fly_pretag_rev
TTTCGGATTTATTAAAGTTTGTGTAGCCCAAACCTGTTGGTTAGTTTTCActtgtcgtcgtcatccttgtagtca
fasta Fasta