Clone: 7270297670695668 H05
Tagged gene: Tfb1
Identifier: FBgn0033929
| Clone | FlyFos028144(pRedFlp-Hgr)(Tfb1[18128]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2R | ||||||||
| 10260629 | 10261264 | 9719 | 10354 | - | gene | Obp50d | coding_transcript | |
| 10258691 | 10260511 | 10472 | 12292 | - | gene | Obp50c | coding_transcript | |
| 10258691 | 10260511 | 10472 | 12292 | - | gene | Obp50b | coding_transcript | |
| 10257836 | 10258621 | 12362 | 13147 | + | gene | Obp50a | coding_transcript | |
| 10256747 | 10257824 | 13159 | 14236 | - | gene | CG34444 | coding_transcript | |
| 10255536 | 10256554 | 14429 | 15447 | - | gene | CG34443 | coding_transcript | |
| 10254337 | 10255379 | 15604 | 16646 | - | gene | CG34442 | coding_transcript | |
| 10253161 | 10254163 | 16820 | 17822 | - | gene | CG34184 | coding_transcript | |
| 10250548 | 10252978 | 18005 | 21497 | - | gene | Tfb1 | coding_transcript | |
| 10250548 | 10252978 | 18005 | 21497 | - | mrna | FBtr0087548 | coding_transcript | |
| 10250548 | 10252978 | 18005 | 21497 | - | mrna | FBtr0305616 | coding_transcript | |
| 10250599 | 10252978 | 18005 | 21446 | - | mrna | FBtr0087549 | coding_transcript | |
| 10250599 | 10252978 | 18005 | 21446 | - | mrna | FBtr0087550 | coding_transcript | |
| 10252732 | 10252978 | 18005 | 19313 | - | exon | coding_transcript | ||
| 10252732 | 10252978 | 18005 | 19313 | - | exon | coding_transcript | ||
| 10252732 | 10252978 | 18005 | 19313 | - | exon | coding_transcript | ||
| 10252732 | 10252978 | 18005 | 19313 | - | exon | coding_transcript | ||
| 10252858 | 10252978 | 18005 | 18125 | - | three_prime_utr | coding_transcript | ||
| 10252858 | 10252978 | 18005 | 18125 | - | three_prime_utr | coding_transcript | ||
| 10252858 | 10252978 | 18005 | 18125 | - | three_prime_utr | coding_transcript | ||
| 10252858 | 10252978 | 18005 | 18125 | - | three_prime_utr | coding_transcript | ||
| 10252732 | 10252857 | 18126 | 19313 | - | cds | coding_transcript | ||
| 10252732 | 10252857 | 18126 | 19313 | - | cds | coding_transcript | ||
| 10252732 | 10252857 | 18126 | 19313 | - | cds | coding_transcript | ||
| 10252732 | 10252857 | 18126 | 19313 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 18202 | 18235 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 18243 | 18314 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 18315 | 18335 | - | cds | TEV | CLC | |
| 2313 | 2336 | 18336 | 18359 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 18360 | 18401 | - | cds | V5 | CLC | |
| 1548 | 2264 | 18408 | 19124 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 19131 | 19190 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2R | ||||||||
| 10252677 | 10252731 | 19314 | 19368 | - | intron | coding_transcript | ||
| 10252677 | 10252731 | 19314 | 19368 | - | intron | coding_transcript | ||
| 10252677 | 10252731 | 19314 | 19368 | - | intron | coding_transcript | ||
| 10252677 | 10252731 | 19314 | 19368 | - | intron | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | exon | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | cds | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | exon | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | cds | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | exon | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | cds | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | exon | coding_transcript | ||
| 10252501 | 10252676 | 19369 | 19544 | - | cds | coding_transcript | ||
| 10252441 | 10252500 | 19545 | 19604 | - | intron | coding_transcript | ||
| 10252441 | 10252500 | 19545 | 19604 | - | intron | coding_transcript | ||
| 10252441 | 10252500 | 19545 | 19604 | - | intron | coding_transcript | ||
| 10252441 | 10252500 | 19545 | 19604 | - | intron | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | exon | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | cds | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | exon | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | cds | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | exon | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | cds | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | exon | coding_transcript | ||
| 10251478 | 10252440 | 19605 | 20567 | - | cds | coding_transcript | ||
| 10251420 | 10251477 | 20568 | 20625 | - | intron | coding_transcript | ||
| 10251420 | 10251477 | 20568 | 20625 | - | intron | coding_transcript | ||
| 10251420 | 10251477 | 20568 | 20625 | - | intron | coding_transcript | ||
| 10251420 | 10251477 | 20568 | 20625 | - | intron | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | exon | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | cds | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | exon | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | cds | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | exon | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | cds | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | exon | coding_transcript | ||
| 10251081 | 10251419 | 20626 | 20964 | - | cds | coding_transcript | ||
| 10251019 | 10251080 | 20965 | 21026 | - | intron | coding_transcript | ||
| 10251019 | 10251080 | 20965 | 21026 | - | intron | coding_transcript | ||
| 10251019 | 10251080 | 20965 | 21026 | - | intron | coding_transcript | ||
| 10251019 | 10251080 | 20965 | 21026 | - | intron | coding_transcript | ||
| 10250599 | 10251018 | 21027 | 21446 | - | exon | coding_transcript | ||
| 10250750 | 10251018 | 21027 | 21295 | - | exon | coding_transcript | ||
| 10250750 | 10251018 | 21027 | 21295 | - | exon | coding_transcript | ||
| 10250757 | 10251018 | 21027 | 21288 | - | exon | coding_transcript | ||
| 10250865 | 10251018 | 21027 | 21180 | - | cds | coding_transcript | ||
| 10250865 | 10251018 | 21027 | 21180 | - | cds | coding_transcript | ||
| 10250865 | 10251018 | 21027 | 21180 | - | cds | coding_transcript | ||
| 10250865 | 10251018 | 21027 | 21180 | - | cds | coding_transcript | ||
| 10250599 | 10250864 | 21181 | 21446 | - | five_prime_utr | coding_transcript | ||
| 10250750 | 10250864 | 21181 | 21295 | - | five_prime_utr | coding_transcript | ||
| 10250750 | 10250864 | 21181 | 21295 | - | five_prime_utr | coding_transcript | ||
| 10250757 | 10250864 | 21181 | 21288 | - | five_prime_utr | coding_transcript | ||
| 10250584 | 10250756 | 21289 | 21461 | - | intron | coding_transcript | ||
| 10250584 | 10250749 | 21296 | 21461 | - | intron | coding_transcript | ||
| 10250627 | 10250749 | 21296 | 21418 | - | intron | coding_transcript | ||
| 10250599 | 10250626 | 21419 | 21446 | - | exon | coding_transcript | ||
| 10250599 | 10250626 | 21419 | 21446 | - | five_prime_utr | coding_transcript | ||
| 10250548 | 10250583 | 21462 | 21497 | - | exon | coding_transcript | ||
| 10250548 | 10250583 | 21462 | 21497 | - | five_prime_utr | coding_transcript | ||
| 10250548 | 10250583 | 21462 | 21497 | - | exon | coding_transcript | ||
| 10250548 | 10250583 | 21462 | 21497 | - | five_prime_utr | coding_transcript | ||
| 10249449 | 10250330 | 21715 | 22596 | - | gene | Arc2 | coding_transcript | |
| 10245432 | 10247799 | 24246 | 26613 | + | gene | Arc1 | coding_transcript | |
| 10243274 | 10244789 | 27256 | 28771 | + | gene | CG8617 | coding_transcript | |
| 10239744 | 10243180 | 28865 | 32301 | - | gene | CG8613 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
Tfb1[18128]::S000169_fly_pretag_rev
CTTGAGGTGTGTGGCAGATGCTCGAGCTCGCCTCCGTTGAGCGTTTGCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
Tfb1[18128]::S000169_fly_pretag_fwd
CCAACAGCAAGTTCGCAACTTGGAAGGAGCGAAAACTGCGCAACACCAGGgaagtgcataccaatcaggacccgc
|
Fasta
|