Clone: 3622867014928135 H10

Tagged gene: CG6398
Identifier: FBgn0030870

Clone FlyFos026980(pRedFlp-Hgr)(CG6398[25789]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
17724873 17735630 15533 27352 + gene CG6398 coding_transcript
17724873 17735630 15533 27352 + mrna FBtr0074462 coding_transcript
17724873 17725479 15533 16139 + exon coding_transcript
17724873 17725353 15533 16013 + five_prime_utr coding_transcript
17725354 17725479 16014 16139 + cds coding_transcript
17725480 17734192 16140 24852 + intron coding_transcript
17734193 17734322 24853 24982 + exon coding_transcript
17734193 17734322 24853 24982 + cds coding_transcript
17734323 17734387 24983 25047 + intron coding_transcript
17734388 17734728 25048 25388 + exon coding_transcript
17734388 17734728 25048 25388 + cds coding_transcript
17734729 17734794 25389 25454 + intron coding_transcript
17734795 17734960 25455 25620 + exon coding_transcript
17734795 17734960 25455 25620 + cds coding_transcript
17734961 17735022 25621 25682 + intron coding_transcript
17735023 17735630 25683 27352 + exon coding_transcript
17735023 17735132 25683 26854 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 25790 25849 + cds 2xTY1 CLC
1548 2264 25856 26572 + cds SGFP CLC
2271 2312 26579 26620 + cds V5 CLC
2313 2336 26621 26644 + cds Precision cut site CLC
2337 2357 26645 26665 + cds TEV CLC
2358 2429 26666 26737 + cds BLRP CLC
3813 3846 26745 26778 + misc_recomb FRT CLC
dmel-5.43-X
17735133 17735630 26855 27352 + three_prime_utr coding_transcript
17736208 17737381 27930 29103 + gene e(y)1 coding_transcript
17737376 17738700 29098 30422 - gene CG8142 coding_transcript
17739021 17741977 30743 33699 + gene Ucp4A coding_transcript
17742143 17744396 33865 36118 - gene CG15814 coding_transcript
17744517 17745922 36239 37644 + gene CG6506 coding_transcript
17745902 17746718 37624 38440 - gene CG32554 coding_transcript
17746991 17750156 38713 41878 - gene CG32557 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG6398[25789]::S000169_fly_pretag_rev
CAATTGCAGCTGCTGGCTGAAGCTGGCTGGCCCCTTCGGGTGTGCCTCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
CG6398[25789]::S000169_fly_pretag_fwd
TCTACCCAGGACCTTACTATCATGGCTCGCAGTACGGACCCTACAACTACgaagtgcataccaatcaggacccgc
 fasta Fasta