Clone: 3622867014928135 B10
Tagged gene: CG6982
Identifier: FBgn0039014
| Clone | FlyFos026969(pRedFlp-Hgr)(CG6982[17751]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 18558078 | 18559573 | 14005 | 15500 | + | gene | Takl2 | coding_transcript | |
| 18552691 | 18558084 | 15494 | 21949 | - | gene | CG17618 | coding_transcript | |
| 18552691 | 18558084 | 15494 | 21949 | - | mrna | FBtr0113328 | coding_transcript | |
| 18552691 | 18558084 | 15494 | 21949 | - | mrna | FBtr0303266 | coding_transcript | |
| 18552691 | 18558084 | 15494 | 21949 | - | gene | CG6982 | coding_transcript | |
| 18552691 | 18558084 | 15494 | 21949 | - | mrna | FBtr0113267 | coding_transcript | |
| 18552691 | 18558084 | 15494 | 21949 | - | mrna | FBtr0113268 | coding_transcript | |
| 18555669 | 18558084 | 15494 | 18971 | - | exon | coding_transcript | ||
| 18555669 | 18558084 | 15494 | 18971 | - | three_prime_utr | coding_transcript | ||
| 18555669 | 18558084 | 15494 | 18971 | - | exon | coding_transcript | ||
| 18555669 | 18558084 | 15494 | 18971 | - | three_prime_utr | coding_transcript | ||
| 18555669 | 18558084 | 15494 | 18971 | - | exon | coding_transcript | ||
| 18555669 | 18558084 | 15494 | 18971 | - | exon | coding_transcript | ||
| 18555830 | 18558084 | 15494 | 17748 | - | three_prime_utr | coding_transcript | ||
| 18555830 | 18558084 | 15494 | 17748 | - | three_prime_utr | coding_transcript | ||
| 18555669 | 18555829 | 17749 | 18971 | - | cds | coding_transcript | ||
| 18555669 | 18555829 | 17749 | 18971 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 17825 | 17858 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 17866 | 17937 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 17938 | 17958 | - | cds | TEV | CLC | |
| 2313 | 2336 | 17959 | 17982 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 17983 | 18024 | - | cds | V5 | CLC | |
| 1548 | 2264 | 18031 | 18747 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 18754 | 18813 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 18555602 | 18555668 | 18972 | 19038 | - | intron | coding_transcript | ||
| 18555602 | 18555668 | 18972 | 19038 | - | intron | coding_transcript | ||
| 18555602 | 18555668 | 18972 | 19038 | - | intron | coding_transcript | ||
| 18555602 | 18555668 | 18972 | 19038 | - | intron | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | exon | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | three_prime_utr | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | exon | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | three_prime_utr | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | exon | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | cds | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | exon | coding_transcript | ||
| 18555539 | 18555601 | 19039 | 19101 | - | cds | coding_transcript | ||
| 18555482 | 18555538 | 19102 | 19158 | - | intron | coding_transcript | ||
| 18555482 | 18555538 | 19102 | 19158 | - | intron | coding_transcript | ||
| 18555482 | 18555538 | 19102 | 19158 | - | intron | coding_transcript | ||
| 18555482 | 18555538 | 19102 | 19158 | - | intron | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | exon | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | three_prime_utr | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | exon | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | three_prime_utr | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | exon | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | cds | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | exon | coding_transcript | ||
| 18555332 | 18555481 | 19159 | 19308 | - | cds | coding_transcript | ||
| 18555262 | 18555331 | 19309 | 19378 | - | intron | coding_transcript | ||
| 18555262 | 18555331 | 19309 | 19378 | - | intron | coding_transcript | ||
| 18555262 | 18555331 | 19309 | 19378 | - | intron | coding_transcript | ||
| 18555262 | 18555331 | 19309 | 19378 | - | intron | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | exon | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | three_prime_utr | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | exon | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | three_prime_utr | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | exon | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | cds | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | exon | coding_transcript | ||
| 18555075 | 18555261 | 19379 | 19565 | - | cds | coding_transcript | ||
| 18555007 | 18555074 | 19566 | 19633 | - | intron | coding_transcript | ||
| 18555007 | 18555074 | 19566 | 19633 | - | intron | coding_transcript | ||
| 18555007 | 18555074 | 19566 | 19633 | - | intron | coding_transcript | ||
| 18555007 | 18555074 | 19566 | 19633 | - | intron | coding_transcript | ||
| 18554931 | 18555006 | 19634 | 19709 | - | exon | coding_transcript | ||
| 18554931 | 18555006 | 19634 | 19709 | - | three_prime_utr | coding_transcript | ||
| 18554931 | 18555006 | 19634 | 19709 | - | exon | coding_transcript | ||
| 18554931 | 18555006 | 19634 | 19709 | - | three_prime_utr | coding_transcript | ||
| 18554931 | 18555006 | 19634 | 19709 | - | exon | coding_transcript | ||
| 18554931 | 18555006 | 19634 | 19709 | - | exon | coding_transcript | ||
| 18554956 | 18555006 | 19634 | 19684 | - | cds | coding_transcript | ||
| 18554956 | 18555006 | 19634 | 19684 | - | cds | coding_transcript | ||
| 18554931 | 18554955 | 19685 | 19709 | - | five_prime_utr | coding_transcript | ||
| 18554931 | 18554955 | 19685 | 19709 | - | five_prime_utr | coding_transcript | ||
| 18554856 | 18554930 | 19710 | 19784 | - | intron | coding_transcript | ||
| 18554856 | 18554930 | 19710 | 19784 | - | intron | coding_transcript | ||
| 18554856 | 18554930 | 19710 | 19784 | - | intron | coding_transcript | ||
| 18554856 | 18554930 | 19710 | 19784 | - | intron | coding_transcript | ||
| 18554565 | 18554855 | 19785 | 20075 | - | exon | coding_transcript | ||
| 18554565 | 18554855 | 19785 | 20075 | - | exon | coding_transcript | ||
| 18554565 | 18554855 | 19785 | 20075 | - | exon | coding_transcript | ||
| 18554565 | 18554855 | 19785 | 20075 | - | five_prime_utr | coding_transcript | ||
| 18554565 | 18554855 | 19785 | 20075 | - | exon | coding_transcript | ||
| 18554565 | 18554855 | 19785 | 20075 | - | five_prime_utr | coding_transcript | ||
| 18554572 | 18554855 | 19785 | 20068 | - | three_prime_utr | coding_transcript | ||
| 18554572 | 18554855 | 19785 | 20068 | - | three_prime_utr | coding_transcript | ||
| 18554565 | 18554571 | 20069 | 20075 | - | cds | coding_transcript | ||
| 18554565 | 18554571 | 20069 | 20075 | - | cds | coding_transcript | ||
| 18552824 | 18554564 | 20076 | 21816 | - | intron | coding_transcript | ||
| 18553214 | 18554564 | 20076 | 21426 | - | intron | coding_transcript | ||
| 18553214 | 18554564 | 20076 | 21426 | - | intron | coding_transcript | ||
| 18553214 | 18554564 | 20076 | 21426 | - | intron | coding_transcript | ||
| 18552691 | 18553213 | 21427 | 21949 | - | exon | coding_transcript | ||
| 18552691 | 18553213 | 21427 | 21949 | - | exon | coding_transcript | ||
| 18552691 | 18553213 | 21427 | 21949 | - | exon | coding_transcript | ||
| 18552691 | 18553213 | 21427 | 21949 | - | five_prime_utr | coding_transcript | ||
| 18553029 | 18553213 | 21427 | 21611 | - | cds | coding_transcript | ||
| 18553131 | 18553213 | 21427 | 21509 | - | cds | coding_transcript | ||
| 18552691 | 18553130 | 21510 | 21949 | - | five_prime_utr | coding_transcript | ||
| 18552691 | 18553028 | 21612 | 21949 | - | five_prime_utr | coding_transcript | ||
| 18552691 | 18552823 | 21817 | 21949 | - | exon | coding_transcript | ||
| 18552691 | 18552823 | 21817 | 21949 | - | five_prime_utr | coding_transcript | ||
| 18550606 | 18552104 | 22536 | 24034 | + | gene | CG4813 | coding_transcript | |
| 18547042 | 18550325 | 24315 | 27598 | + | gene | Irp-1A | coding_transcript | |
| 18536605 | 18546872 | 27768 | 38035 | + | gene | wge | coding_transcript | |
| 18533510 | 18536486 | 38154 | 41130 | + | gene | CG4907 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG6982[17751]::S000169_fly_pretag_fwd
AGATCTACTATAAGGAAAGGAAAATCGTACATGAAAACCAAATGCGCGCCgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG6982[17751]::S000169_fly_pretag_rev
ATATACTTATTCTACAGAACGACGTCAGGCAGGTCGTGCGGCCTTGCCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|