Clone: 5835759330954416 G12
Tagged gene: CG7530
Identifier: FBgn0038256
| Clone | FlyFos026827(pRedFlp-Hgr)(CG7530[18544]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 10550472 | 10557231 | 18133 | 25954 | - | gene | CG7530 | coding_transcript | |
| 10550472 | 10557231 | 18133 | 25954 | - | mrna | FBtr0083019 | coding_transcript | |
| 10550472 | 10557231 | 18133 | 25954 | - | mrna | FBtr0083020 | coding_transcript | |
| 10550472 | 10556996 | 18133 | 25719 | - | mrna | FBtr0083021 | coding_transcript | |
| 10550472 | 10551111 | 18133 | 19834 | - | exon | coding_transcript | ||
| 10550472 | 10551111 | 18133 | 19834 | - | exon | coding_transcript | ||
| 10550472 | 10551111 | 18133 | 19834 | - | exon | coding_transcript | ||
| 10550472 | 10550880 | 18133 | 18541 | - | three_prime_utr | coding_transcript | ||
| 10550472 | 10550880 | 18133 | 18541 | - | three_prime_utr | coding_transcript | ||
| 10550472 | 10550880 | 18133 | 18541 | - | three_prime_utr | coding_transcript | ||
| 10550881 | 10551111 | 18542 | 19834 | - | cds | coding_transcript | ||
| 10550881 | 10551111 | 18542 | 19834 | - | cds | coding_transcript | ||
| 10550881 | 10551111 | 18542 | 19834 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 18618 | 18651 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 18659 | 18730 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 18731 | 18751 | - | cds | TEV | CLC | |
| 2313 | 2336 | 18752 | 18775 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 18776 | 18817 | - | cds | V5 | CLC | |
| 1548 | 2264 | 18824 | 19540 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 19547 | 19606 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 10551112 | 10551178 | 19835 | 19901 | - | intron | coding_transcript | ||
| 10551112 | 10551178 | 19835 | 19901 | - | intron | coding_transcript | ||
| 10551112 | 10551178 | 19835 | 19901 | - | intron | coding_transcript | ||
| 10551179 | 10551652 | 19902 | 20375 | - | exon | coding_transcript | ||
| 10551179 | 10551652 | 19902 | 20375 | - | cds | coding_transcript | ||
| 10551179 | 10551652 | 19902 | 20375 | - | exon | coding_transcript | ||
| 10551179 | 10551652 | 19902 | 20375 | - | cds | coding_transcript | ||
| 10551179 | 10551652 | 19902 | 20375 | - | exon | coding_transcript | ||
| 10551179 | 10551652 | 19902 | 20375 | - | cds | coding_transcript | ||
| 10551653 | 10551761 | 20376 | 20484 | - | intron | coding_transcript | ||
| 10551653 | 10551761 | 20376 | 20484 | - | intron | coding_transcript | ||
| 10551653 | 10551761 | 20376 | 20484 | - | intron | coding_transcript | ||
| 10551762 | 10551869 | 20485 | 20592 | - | exon | coding_transcript | ||
| 10551762 | 10551869 | 20485 | 20592 | - | cds | coding_transcript | ||
| 10551762 | 10551869 | 20485 | 20592 | - | exon | coding_transcript | ||
| 10551762 | 10551869 | 20485 | 20592 | - | cds | coding_transcript | ||
| 10551762 | 10551869 | 20485 | 20592 | - | exon | coding_transcript | ||
| 10551762 | 10551869 | 20485 | 20592 | - | cds | coding_transcript | ||
| 10551870 | 10552911 | 20593 | 21634 | - | intron | coding_transcript | ||
| 10551870 | 10552911 | 20593 | 21634 | - | intron | coding_transcript | ||
| 10551870 | 10552911 | 20593 | 21634 | - | intron | coding_transcript | ||
| 10552912 | 10553049 | 21635 | 21772 | - | exon | coding_transcript | ||
| 10552912 | 10553049 | 21635 | 21772 | - | cds | coding_transcript | ||
| 10552912 | 10553049 | 21635 | 21772 | - | exon | coding_transcript | ||
| 10552912 | 10553049 | 21635 | 21772 | - | cds | coding_transcript | ||
| 10552912 | 10553049 | 21635 | 21772 | - | exon | coding_transcript | ||
| 10552912 | 10553049 | 21635 | 21772 | - | cds | coding_transcript | ||
| 10553050 | 10556232 | 21773 | 24955 | - | intron | coding_transcript | ||
| 10553050 | 10556232 | 21773 | 24955 | - | intron | coding_transcript | ||
| 10553050 | 10556232 | 21773 | 24955 | - | intron | coding_transcript | ||
| 10556233 | 10557231 | 24956 | 25954 | - | exon | coding_transcript | ||
| 10556233 | 10556351 | 24956 | 25074 | - | exon | coding_transcript | ||
| 10556233 | 10556351 | 24956 | 25074 | - | exon | coding_transcript | ||
| 10556233 | 10556337 | 24956 | 25060 | - | cds | coding_transcript | ||
| 10556233 | 10556337 | 24956 | 25060 | - | cds | coding_transcript | ||
| 10556233 | 10556337 | 24956 | 25060 | - | cds | coding_transcript | ||
| 10556338 | 10557231 | 25061 | 25954 | - | five_prime_utr | coding_transcript | ||
| 10556338 | 10556351 | 25061 | 25074 | - | five_prime_utr | coding_transcript | ||
| 10556338 | 10556351 | 25061 | 25074 | - | five_prime_utr | coding_transcript | ||
| 10556352 | 10557126 | 25075 | 25849 | - | intron | coding_transcript | ||
| 10556352 | 10556761 | 25075 | 25484 | - | intron | coding_transcript | ||
| 10556762 | 10556996 | 25485 | 25719 | - | exon | coding_transcript | ||
| 10556762 | 10556996 | 25485 | 25719 | - | five_prime_utr | coding_transcript | ||
| 10557127 | 10557231 | 25850 | 25954 | - | exon | coding_transcript | ||
| 10557127 | 10557231 | 25850 | 25954 | - | five_prime_utr | coding_transcript | ||
| 10558427 | 10566933 | 27150 | 35656 | - | gene | eff | coding_transcript | |
| 10571623 | 10573043 | 40346 | 41766 | - | gene | smp-30 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG7530[18544]::S000169_fly_pretag_fwd
TCTATGCCGAGTATCGCCTGAATAACGGATGCACTGCACCAGTTCTCTCCgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG7530[18544]::S000169_fly_pretag_rev
CTCCTCGGATCTTCGGATCTTAACTCAGATGTTCGGATCTTCAAGTTCTActtgtcgtcgtcatccttgtagtca
|
Fasta
|