Clone: 03996259806504221 B11

Tagged gene: CG17376
Identifier: FBgn0042189

Clone FlyFos026598(pRedFlp-Hgr)(CG17376[31106]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
6789761 6798864 20764 29867 - gene nrv2 coding_transcript
6799946 6800834 30949 32899 - gene CG17376 coding_transcript
6799946 6800834 30949 32899 - mrna FBtr0079379 coding_transcript
6799946 6800834 30949 32899 - mrna FBtr0079380 coding_transcript
6799946 6800111 30949 32176 - exon coding_transcript
6799946 6800111 30949 32176 - three_prime_utr coding_transcript
6799946 6800111 30949 32176 - exon coding_transcript
6799946 6800100 30949 31103 - three_prime_utr coding_transcript
6800101 6800111 31104 32176 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 31180 31213 - misc_recomb FRT CLC
2358 2429 31221 31292 - cds BLRP CLC
2337 2357 31293 31313 - cds TEV CLC
2313 2336 31314 31337 - cds Precision cut site CLC
2271 2312 31338 31379 - cds V5 CLC
1548 2264 31386 32102 - cds SGFP CLC
1482 1541 32109 32168 - cds 2xTY1 CLC
dmel-5.43-2L
6800112 6800488 32177 32553 - intron coding_transcript
6800112 6800162 32177 32227 - intron coding_transcript
6800163 6800315 32228 32380 - exon coding_transcript
6800163 6800208 32228 32273 - three_prime_utr coding_transcript
6800209 6800315 32274 32380 - cds coding_transcript
6800316 6800650 32381 32715 - intron coding_transcript
6800489 6800698 32554 32763 - exon coding_transcript
6800489 6800681 32554 32746 - cds coding_transcript
6800651 6800698 32716 32763 - exon coding_transcript
6800651 6800681 32716 32746 - cds coding_transcript
6800682 6800698 32747 32763 - five_prime_utr coding_transcript
6800682 6800698 32747 32763 - five_prime_utr coding_transcript
6800699 6800752 32764 32817 - intron coding_transcript
6800699 6800752 32764 32817 - intron coding_transcript
6800753 6800834 32818 32899 - exon coding_transcript
6800753 6800834 32818 32899 - five_prime_utr coding_transcript
6800753 6800834 32818 32899 - exon coding_transcript
6800753 6800834 32818 32899 - five_prime_utr coding_transcript
6801378 6802789 33443 34854 - gene CG17377 coding_transcript
6803033 6804372 35098 36437 + gene CG11236 coding_transcript
6804619 6805792 36684 37857 - gene CG17375 coding_transcript

Sets

Oligos

Name/Sequence Export
CG17376[31106]::S000169_fly_pretag_fwd
TGTTTTAGTACATGTACCTCTTATTCTAATTTTCTCCCTCAGGTGGCTTCgaagtgcataccaatcaggacccgc
fasta Fasta
CG17376[31106]::S000169_fly_pretag_rev
TTCTCAGTTCCGCCGCTTATATGGGTCGTCCGTAGTAACAGAGCCGCTTActtgtcgtcgtcatccttgtagtca
fasta Fasta