Clone: 03996259806504221 A11
Tagged gene: CG17377
Identifier: FBgn0031859
Clone | FlyFos026598(pRedFlp-Hgr)(CG17377[32645]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
6789761 | 6798864 | 20764 | 29867 | - | gene | nrv2 | coding_transcript | |
6799946 | 6800834 | 30949 | 31837 | - | gene | CG17376 | coding_transcript | |
6801378 | 6802789 | 32381 | 34854 | - | gene | CG17377 | coding_transcript | |
6801378 | 6802789 | 32381 | 34854 | - | mrna | FBtr0079377 | coding_transcript | |
6801378 | 6802789 | 32381 | 34854 | - | mrna | FBtr0309814 | coding_transcript | |
6801378 | 6802789 | 32381 | 34854 | - | mrna | FBtr0309815 | coding_transcript | |
6801378 | 6801650 | 32381 | 33715 | - | exon | coding_transcript | ||
6801378 | 6801650 | 32381 | 33715 | - | three_prime_utr | coding_transcript | ||
6801378 | 6801650 | 32381 | 33715 | - | exon | coding_transcript | ||
6801378 | 6801650 | 32381 | 33715 | - | exon | coding_transcript | ||
6801378 | 6801650 | 32381 | 33715 | - | three_prime_utr | coding_transcript | ||
6801378 | 6801639 | 32381 | 32642 | - | three_prime_utr | coding_transcript | ||
6801640 | 6801650 | 32643 | 33715 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 32719 | 32752 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 32760 | 32831 | - | cds | BLRP | CLC | |
2337 | 2357 | 32832 | 32852 | - | cds | TEV | CLC | |
2313 | 2336 | 32853 | 32876 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 32877 | 32918 | - | cds | V5 | CLC | |
1548 | 2264 | 32925 | 33641 | - | cds | SGFP | CLC | |
1482 | 1541 | 33648 | 33707 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2L | ||||||||
6801651 | 6802039 | 33716 | 34104 | - | intron | coding_transcript | ||
6801651 | 6801707 | 33716 | 33772 | - | intron | coding_transcript | ||
6801651 | 6801705 | 33716 | 33770 | - | intron | coding_transcript | ||
6801706 | 6801852 | 33771 | 33917 | - | exon | coding_transcript | ||
6801706 | 6801850 | 33771 | 33915 | - | three_prime_utr | coding_transcript | ||
6801708 | 6802547 | 33773 | 34612 | - | exon | coding_transcript | ||
6801708 | 6801950 | 33773 | 34015 | - | three_prime_utr | coding_transcript | ||
6801851 | 6801852 | 33916 | 33917 | - | cds | coding_transcript | ||
6801853 | 6802249 | 33918 | 34314 | - | intron | coding_transcript | ||
6801951 | 6802547 | 34016 | 34612 | - | cds | coding_transcript | ||
6802040 | 6802547 | 34105 | 34612 | - | exon | coding_transcript | ||
6802040 | 6802547 | 34105 | 34612 | - | cds | coding_transcript | ||
6802250 | 6802547 | 34315 | 34612 | - | exon | coding_transcript | ||
6802250 | 6802547 | 34315 | 34612 | - | cds | coding_transcript | ||
6802548 | 6802610 | 34613 | 34675 | - | intron | coding_transcript | ||
6802548 | 6802610 | 34613 | 34675 | - | intron | coding_transcript | ||
6802548 | 6802610 | 34613 | 34675 | - | intron | coding_transcript | ||
6802611 | 6802654 | 34676 | 34719 | - | exon | coding_transcript | ||
6802611 | 6802654 | 34676 | 34719 | - | exon | coding_transcript | ||
6802611 | 6802654 | 34676 | 34719 | - | exon | coding_transcript | ||
6802611 | 6802637 | 34676 | 34702 | - | cds | coding_transcript | ||
6802611 | 6802637 | 34676 | 34702 | - | cds | coding_transcript | ||
6802611 | 6802637 | 34676 | 34702 | - | cds | coding_transcript | ||
6802638 | 6802654 | 34703 | 34719 | - | five_prime_utr | coding_transcript | ||
6802638 | 6802654 | 34703 | 34719 | - | five_prime_utr | coding_transcript | ||
6802638 | 6802654 | 34703 | 34719 | - | five_prime_utr | coding_transcript | ||
6802655 | 6802707 | 34720 | 34772 | - | intron | coding_transcript | ||
6802655 | 6802707 | 34720 | 34772 | - | intron | coding_transcript | ||
6802655 | 6802707 | 34720 | 34772 | - | intron | coding_transcript | ||
6802708 | 6802789 | 34773 | 34854 | - | exon | coding_transcript | ||
6802708 | 6802789 | 34773 | 34854 | - | five_prime_utr | coding_transcript | ||
6802708 | 6802789 | 34773 | 34854 | - | exon | coding_transcript | ||
6802708 | 6802789 | 34773 | 34854 | - | five_prime_utr | coding_transcript | ||
6802708 | 6802789 | 34773 | 34854 | - | exon | coding_transcript | ||
6802708 | 6802789 | 34773 | 34854 | - | five_prime_utr | coding_transcript | ||
6803033 | 6804372 | 35098 | 36437 | + | gene | CG11236 | coding_transcript | |
6804619 | 6805792 | 36684 | 37857 | - | gene | CG17375 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG17377[32645]::S000169_fly_pretag_rev
GAAGTGGCCCATATCAGGATCCGATCGAAACACTTGCCAGGAAATACTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG17377[32645]::S000169_fly_pretag_fwd
ATACCTTCTGCATTCACTGGTTTTACCTTTCTCATCCCACAGGTGGCTTAgaagtgcataccaatcaggacccgc
|
Fasta |