Clone: 03996259806504221 E08
Tagged gene: CG3091
Identifier: FBgn0029608
Clone | FlyFos026539(pRedFlp-Hgr)(CG3091[32952]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
2165318 | 2169111 | 10473 | 14266 | + | gene | CG2918 | coding_transcript | |
2159024 | 2164789 | 14795 | 20560 | + | gene | CG2924 | coding_transcript | |
2156873 | 2158858 | 20726 | 22711 | - | gene | CG3071 | coding_transcript | |
2154236 | 2156560 | 23024 | 25348 | + | gene | l(1)G0144 | coding_transcript | |
2148432 | 2153896 | 25688 | 31152 | + | gene | CG3078 | coding_transcript | |
2146365 | 2148167 | 31417 | 34281 | + | gene | CG3091 | coding_transcript | |
2146365 | 2148167 | 31417 | 34281 | + | mrna | FBtr0070416 | coding_transcript | |
2146365 | 2148167 | 31417 | 34281 | + | mrna | FBtr0100226 | coding_transcript | |
2147991 | 2148167 | 31417 | 31593 | + | exon | coding_transcript | ||
2147991 | 2148167 | 31417 | 31593 | + | exon | coding_transcript | ||
2148121 | 2148167 | 31417 | 31463 | + | five_prime_utr | coding_transcript | ||
2148121 | 2148167 | 31417 | 31463 | + | five_prime_utr | coding_transcript | ||
2147991 | 2148120 | 31464 | 31593 | + | cds | coding_transcript | ||
2147991 | 2148120 | 31464 | 31593 | + | cds | coding_transcript | ||
2147644 | 2147990 | 31594 | 31940 | + | intron | coding_transcript | ||
2147644 | 2147990 | 31594 | 31940 | + | intron | coding_transcript | ||
2147484 | 2147643 | 31941 | 32100 | + | exon | coding_transcript | ||
2147484 | 2147643 | 31941 | 32100 | + | cds | coding_transcript | ||
2147484 | 2147643 | 31941 | 32100 | + | exon | coding_transcript | ||
2147484 | 2147643 | 31941 | 32100 | + | cds | coding_transcript | ||
2147432 | 2147483 | 32101 | 32152 | + | intron | coding_transcript | ||
2147432 | 2147483 | 32101 | 32152 | + | intron | coding_transcript | ||
2146949 | 2147431 | 32153 | 32635 | + | exon | coding_transcript | ||
2147314 | 2147431 | 32153 | 32270 | + | cds | coding_transcript | ||
2147350 | 2147431 | 32153 | 32234 | + | exon | coding_transcript | ||
2147350 | 2147431 | 32153 | 32234 | + | cds | coding_transcript | ||
2147282 | 2147349 | 32235 | 32302 | + | intron | coding_transcript | ||
2146949 | 2147313 | 32271 | 32635 | + | three_prime_utr | coding_transcript | ||
2146949 | 2147281 | 32303 | 32635 | + | exon | coding_transcript | ||
2146949 | 2147281 | 32303 | 32635 | + | cds | coding_transcript | ||
2146894 | 2146948 | 32636 | 32690 | + | intron | coding_transcript | ||
2146894 | 2146948 | 32636 | 32690 | + | intron | coding_transcript | ||
2146757 | 2146893 | 32691 | 32827 | + | exon | coding_transcript | ||
2146757 | 2146893 | 32691 | 32827 | + | cds | coding_transcript | ||
2146757 | 2146893 | 32691 | 32827 | + | exon | coding_transcript | ||
2146757 | 2146893 | 32691 | 32827 | + | three_prime_utr | coding_transcript | ||
2146699 | 2146756 | 32828 | 32885 | + | intron | coding_transcript | ||
2146699 | 2146756 | 32828 | 32885 | + | intron | coding_transcript | ||
2146365 | 2146698 | 32886 | 34281 | + | exon | coding_transcript | ||
2146365 | 2146698 | 32886 | 34281 | + | exon | coding_transcript | ||
2146365 | 2146698 | 32886 | 34281 | + | three_prime_utr | coding_transcript | ||
2146629 | 2146698 | 32886 | 34017 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 32953 | 33012 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 33019 | 33735 | + | cds | SGFP | CLC | |
2271 | 2312 | 33742 | 33783 | + | cds | V5 | CLC | |
2313 | 2336 | 33784 | 33807 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 33808 | 33828 | + | cds | TEV | CLC | |
2358 | 2429 | 33829 | 33900 | + | cds | BLRP | CLC | |
3813 | 3846 | 33908 | 33941 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
2146365 | 2146628 | 34018 | 34281 | + | three_prime_utr | coding_transcript | ||
2144178 | 2146026 | 34620 | 36468 | + | gene | CG3191 | coding_transcript | |
2141627 | 2144015 | 36631 | 39019 | + | gene | crn | coding_transcript | |
2140264 | 2141609 | 39037 | 40382 | - | gene | Or2a | coding_transcript | |
2136137 | 2140079 | 40567 | 44509 | - | gene | fs(1)K10 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG3091[32952]::S000169_fly_pretag_fwd
AGCGGTACTGGAAGGTGGCCGCTCAGAGCAAGAGTCGGTGGTCCTGGTTCgaagtgcataccaatcaggacccgc
|
Fasta |
CG3091[32952]::S000169_fly_pretag_rev
GATGCTTGATCACATTTATGTTTATATCACGTTCGATGATCAGGATATCActtgtcgtcgtcatccttgtagtca
|
Fasta |